-
cancer cells classic-like should be cancer classical cells according to the PDAC consensus classification (basal-like and classical).
"bulk references" could be confusing. Suggestion instead: cell-ty…
-
I have plugin set up like this:
```
const tablePlugin = PluginEditTable({
typeTable: ['table'],
typeRow: ['table_row'],
// and elements
typeCell: ['table_cell', 'table_heading']
});
`…
-
When I open a .cppipe that has "Select the measurements to export" == Yes with a number of measurements selected (e.g. [JUMP analysis pipeline](https://github.com/broadinstitute/imaging-platform-pipel…
-
I have a dataset spanning several brain regions, each region having 15-20 cell types. For a single brain region, I have created an independent `misc` slot in my Seurat object for each meta cell type:
…
-
Hi,
Thank you for this amazing package. Is it possible to analyse the co-occurrence of variable cell states across cell types using the state theta values? Similar to various ecotype papers where t…
-
The documentation for `excel_sheets()` reads:
> The list of sheet names is especially useful when you want to iterate over all of the sheets in a workbook. The `vignette("readxl-workflows")` articl…
-
I may be wrong but, in my data, when sender cell is set to only one cell type (in your example, you used 6 cell types), the figure "LFC in sender" cannot be plotted correctly, it shows "NA" genes with…
-
Replicate bug on exaDEM with spheres and a radius size of `0.5`
Bug:
```
init:
- lattice:
structure: SC
types: [ 0 ]
size: [ 1.0 , 1.0 , 1.0 ]
repeats: [ 5, 5 , …
-
Based on
https://github.com/CliMA/Oceananigans.jl/blob/2e4ba6b36bf012d5dcb89ddc7160a10f774aadbe/src/TurbulenceClosures/turbulence_closure_diagnostics.jl#L67-L69
CATKE should also have an infinit…
-
cc @turbomam
If we need to represent Illumina NovaSeq 6000 S4, I assume we would create a subclass of
id: OBI:0400043
name: flow cell
def: "Aparatus in the fluidic subsystem where the sheath…