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Unable to input VCF for variants/genes input step
![image](https://user-images.githubusercontent.com/22081541/148126555-f7f9aeaf-d5f2-47ea-bdc0-208b0ceefc46.png)
Download this VCF that contains …
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I am having an issue where STAR isn't processing all of my input reads. The program runs without error, but it tells me at the end that it only inputs 157 reads when there should be thousands in my tr…
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I have an analysis in https://mosaic.chpc.utah.edu/#/projects/521/analyses. If I launch the analysis, the variants don't show. This is the opening view:
![Screen Shot 2021-03-18 at 12 11 37 PM](htt…
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We currently recommend stimela pull to pre-pull the containers. Radiopadre also needs a pull-the-image option.
There are other things the pipeline may attempt to download (catalogs in the mask wo…
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## Fan's Lab
- r3.6.3: installed via conda,
```bash
> capabilities()
jpeg png tiff tcltk X11 aqua
TRUE TRUE TRUE TRUE …
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Dear David,
I installed Orthofinder v2.5.4 via conda, however, when I run the ExampleData, I get the following error:
OrthoFinder version 2.5.4 Copyright (C) 2014 David Emms
2022-08-11 10:01:…
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* https://journals.ametsoc.org/view/journals/wefo/32/3/waf-d-16-0171_1.xml
* https://www.sciencedirect.com/science/article/pii/S016980951000030X
HRRR data download: http://home.chpc.utah.edu/~u0…
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I'm getting a lot of errors from this; I assume from lib/clusterUtils.pm which has:
```
find /scratch/local/ -user $user -exec rm -rf {} \\;
```
It should instead use the tmp path from the config
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Hi team,
Hope you are all well.
Recently we've been trying to install STRetch into HPC system. But it continues to fail. Please see the error message below.
```````````
[dleo2939@login3 ~]$…
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I'm sorry but I cannot seem to find the tar.gz file located anywhere on your github or with a google search. I would like to install your software but cannot proceed until I have this direction. Than…