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clin.iobio
Clin.iobio - Workflow and reporting for iobio variant analysis pipeline
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Clin 3.3.1
#497
tonydisera
closed
11 months ago
0
Clin 3.3.1
#496
tonydisera
closed
11 months ago
0
Update code to change 'unknown-sig' to 'uncertain-sig' for variant interpretation.
#495
tonydisera
opened
11 months ago
0
Dev
#493
tonydisera
closed
1 year ago
0
Make changes to support app notifications in gene.iobio
#492
tonydisera
closed
1 year ago
0
Bump minimist, mkdirp, @vue/cli-plugin-e2e-cypress and handlebars
#491
dependabot[bot]
opened
1 year ago
0
Bump express from 4.17.1 to 4.17.3
#490
dependabot[bot]
opened
1 year ago
0
Bump qs from 6.5.2 to 6.5.3
#489
dependabot[bot]
opened
1 year ago
0
Bump decode-uri-component from 0.2.0 to 0.2.2
#488
dependabot[bot]
opened
1 year ago
0
When running clin.iobio using a configuration file it freezes on Review variants
#487
JasperO98
opened
1 year ago
3
3.2.4
#486
tonydisera
closed
1 year ago
0
Clin 3.2.4
#485
tonydisera
closed
1 year ago
0
Launch stand-alone clin.iobio with URL parameters for variant and alignment files (like gene.iobio)
#484
tonydisera
closed
1 year ago
0
When reloading saved json analysis (standalone clin.iobio), the findings page shows confusing message about reviewing variants
#483
tonydisera
opened
1 year ago
0
Bump terser from 4.6.2 to 4.8.1
#482
dependabot[bot]
opened
1 year ago
0
Bump shell-quote from 1.7.2 to 1.7.3
#481
dependabot[bot]
opened
1 year ago
0
Bump eventsource from 1.0.7 to 1.1.2
#480
dependabot[bot]
opened
1 year ago
0
Bump thenify from 3.3.0 to 3.3.1
#479
dependabot[bot]
opened
1 year ago
0
Dev
#478
tonydisera
closed
1 year ago
0
Up gene cap in clin.iobio genepanel
#477
AlistairNWard
opened
1 year ago
0
HPO gene selection fails (genepanel)
#476
AlistairNWard
opened
1 year ago
1
April 27, 2022 Meeting https://github.com/iobio/calypso/issues/45
#475
tonydisera
closed
2 years ago
0
April 27, 2022 Meeting https://github.com/iobio/calypso/issues/45
#474
tonydisera
closed
2 years ago
0
April 27, 2022 Meeting https://github.com/iobio/calypso/issues/45
#473
tonydisera
closed
2 years ago
0
v3.2.0
#472
tonydisera
closed
2 years ago
0
Bump ajv from 6.10.2 to 6.12.6
#471
dependabot[bot]
opened
2 years ago
0
Dev
#470
tonydisera
closed
2 years ago
0
#468 Use trio, build grch38 for demo
#469
tonydisera
closed
2 years ago
0
Use GRCh38 demo data, for trio (not quad). Update case summary to "three individuals"
#468
tonydisera
opened
2 years ago
0
Styling changes to landing page. Get rid of sleek man in lab coat. …
#467
tonydisera
closed
2 years ago
0
#460 Discovered that QC data was hardcoded for demo data. Altered co…
#466
tonydisera
closed
2 years ago
0
#458 Serve GRCh37 and GRCh38 bed from AWS S3 bucket rather than from …
#465
tonydisera
closed
2 years ago
0
Make ped file input optional
#464
mvelinder
opened
2 years ago
0
Adding notes to a variant causes problem
#463
AlistairNWard
opened
2 years ago
0
Highlight the need to select genome build when inputting own data
#462
mvelinder
opened
2 years ago
0
#446 Temporary workaround for clin.iobio demo so that WARS1 gene is c…
#461
tonydisera
closed
2 years ago
0
Demo data should pull alignment and vcf stats from real-time data, not static hard-coded values.
#460
tonydisera
opened
2 years ago
2
#455 Provide new URLs to download example data config and variant csv…
#459
tonydisera
closed
2 years ago
0
The QC page fails to load bam stats (intermittent)
#458
tonydisera
opened
2 years ago
1
Tony dev 444
#457
tonydisera
closed
2 years ago
0
Tony dev 444
#456
tonydisera
closed
2 years ago
0
Import variants from VCF does not work (and probably CSV also)
#455
mvelinder
opened
2 years ago
1
For paper - Phenotype terms prepopulated when loading own data #442
#454
tonydisera
closed
2 years ago
0
Ability to import VCFs from URL
#453
mvelinder
opened
2 years ago
0
For paper - Demo data is a quad #449
#452
tonydisera
closed
2 years ago
0
Genepanel - add tooltip if term not analyzed
#451
AlistairNWard
opened
2 years ago
0
Indicated when pulling from multiple vcf files
#450
AlistairNWard
opened
2 years ago
0
For paper - Demo data is a quad
#449
AlistairNWard
opened
2 years ago
0
Add support for VCF files (variant lists) in public-facing clin
#448
mvelinder
opened
2 years ago
0
Add support for VCF files (variant lists) in public-facing clin
#447
mvelinder
opened
2 years ago
0
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