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### Context
ViPR is being replaced with BV-BRC with final transfer possibly occurring by the end of the year (2022-12-31) which might disrupt pathogen builds.
### Description
For any pa…
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Hello interested contributors! Welcome to the `covid19-review` project. Our goal here is to provide an up-to-date perspective on the current peer reviewed and preprinted literature around diagnostics …
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Write a script to standardize access and branch protections across all repos in the Reich Lab (with the exception of a few that would break as a result of branch protection updates, as noted here: htt…
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Noticed a couple of bugs when using the Arbovirus checkboxes to filter the map
- Screenshot 1: Only Zika and Dengue selected but the # of estimates clustered show other viruses
- Screenshot 2: ESM De…
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Dear all.
I've been viewing the issues section for a while and I would like to ask a few questions, if anyone could please reply. I know that this issue section might not be suitable but I don't …
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Sadly the issue is still active, at least for taxons ebola-zaire and mpox.
See #356
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New version of client (16.16.0) available at https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LATES…
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**Submitting author:** @andreatta-ale (Alessandro Josue da Silva Andreatta)
**Repository:** https://github.com/andreatta-ale/external-agents-detector
**Branch with paper.md** (empty if default branch)…
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Though the header of the genome MT597439 says **"Dengue virus type 2 isolate 43257 polyprotein (POLY) gene, partial cds; and sfRNA2 lncRNA gene, partial sequence"**, the serotype section of this genom…
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The notes below are from a conversation with BASE who are trying to harvest from [our endpoint](https://enkore.toolforge.org/oai_pmh/?verb=ListRecords&metadataPrefix=oai_dc) to update [their represent…
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when getting oriented to the `epidist` database using `epidist_db()`, it isn't immediately obvious which diseases, pathogens, and epi distributions are available for selection (_i.e._, for input into …