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I might be a minority user, but I have a Windows laptop with access to a pretty powerful Linux computing cluster. I ran all of the various Leafcutter analyses on the cluster, but shiny doesn't work re…
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Hi.
I might be doing something incorrect, but I find one-base and other short exons in TCGA and GTEx exon count data. I wasn't able to find an explanation in your Genome Biology paper, so I would a…
bzip2 updated
4 years ago
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/LieberInstitute/megadepth
Confirm the following b…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/LieberInstitute/recount3
Confirm the following by…
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Hi all,
Not sure if this is a problem of the project I decided to work with (SRP058740), or could be more general. First, let me state that according to the SRA website, I would expect around 30-60…
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This library looks really awesome! I'm having a problem using it in an Rmarkdown notebook in Rstudio though. When I execute `datatable(iris)` from the console the table appears perfectly in the viewer…
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I'm trying to run the F-statistic version of derfinder. I follow the example in the docs, with only difference that my `fullcov` equivalent has five chromosomes instead of just one, and only two sampl…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/LieberInstitute/brainflowprobes
Confirm the follo…
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At the moment, we're adding `conda_build_config.yaml` files to the various bioconductor packages that can only exist for R 3.5. This is less than ideal and is leading to a lot of extra files. For the …
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I'm creating an issue for each workshop, to be closed when both 1) the workshop is complete, and 2) it compiles without problems. Please note problems and status updates here.