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We need to ensure that ROIs and overlays are synced properly between IJ1 and IJ2 data structures, in every relevant case.
At the time this ticket was originally created, the OverlayHarmonizer (was Ov…
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**Submitter Name and ORCiD**
Amy Zimmerman
**Submission ID**
1d87912e-9c22-4717-acf3-483a9335e770
**Have data already been generated for your study?**
No
**PI Name and ORCiD**
Amy Zimmerm…
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running Harmonizer-first time after using it on test data a couple of times
Command line:
java -jar GenotypeHarmonizer.jar --input Shukakaa --inputType PLINK_Bed --update-id --output binaryPlinkSh…
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- install npm
- https://linuxize.com/post/how-to-install-node-js-on-ubuntu-20-04/#installing-nodejs-and-npm-using-nvm
- `curl -o- https://raw.githubusercontent.com/nvm-sh/nvm/v0.35.3/install.sh …
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Hi,
It helps to save memory by spliting image into patches, but each patches are treated individually, is there another way to ultilize the global info of the original image for harmonization with l…
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https://eigakan.org/theaterpage/schedule.php?t=ainouta
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@pkalita-lbl has modifications to DataHarmonizer that make the more specific GOLD path elements dependent on the more general ones. It also resets the more specific ones if a more general one is chang…
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and update the README to include the (manual) steps below, and notes about which configuration files should be changed if the classes in the schema change.
- would have to edit the paths in `main.js`…
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In http://typedrawers.com/discussion/1111/fontforge-harmonizer Michael Vokits said,
> As for FF, the only feature I think it actually lacks is the ability to always show node positions, and that's p…
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Hi,
Recently I have been processing some haploid vcf files from HipSTR output and I find I can't merge haploid data through mergeSTR, and the errors are as follows:
TypeError: ufunc 'isnan' not …