-
https://mp.weixin.qq.com/s/avHS4ojBOkNDMwGFX0jdqQ
-
Hello,
I had a question regarding the MiXCR's defaut library reference sequences. I noticed there were some differences in terms of list of alleles for specific v genes and what v genes were inclu…
-
https://mp.weixin.qq.com/s/IfLm9MOpm6RKjCsXy_1AWw
ixxmu updated
1 month ago
-
Hi,
SigProfilerExtractor is really handy. It has helped me a lot.
However, I have a question about input samples. Do we need to delete hypermutation samples? Will samples with too many mutations …
-
Hi,
I'm new to huggingface and gatortron. I wish to generate text from a medical description for example, but not sure how to do it with the gatortron models. I've tried to adapt other examples (e.…
-
Hi Nick,
Lovely work on scRepertoire and been an avid user, mainly for TCRs. Lately, I've begun to explore its usage for BCRs and I have some questions.
(1) Based on expression of Ig genes, I've…
-
the statistics of read numbers seems not consistent between outputs.
for example,
in trust4 **running log**, "Found **1866804** reads." and "Assembled **1158765** reads."
in **airr.tsv** , the col…
-
Consider a new rotate_to_min function that handles both strands at the same time. Code as is readable as is, but the information in one of the strads is not used. This is not a problem as long as ther…
-
### **Description—First sequence spotted by @c19850727 (Sakaguchi Hitoshi) and @hynnspylor ([here](https://github.com/cov-lineages/pango-designation/issues/2068#issuecomment-1680316776)) **
**Sub-li…
-
Hello,
Is Mixcr suitable for pacbio data analysis. Can I skip assemble and only for clonetyping?