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Setup a meeting with EBI folks:
* Talk about work devision (especially in the next few months) to make sure Kate is not pulled into 20 different directions.
* Which of Rajas EBI projects can be ta…
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I got the following error when I try to create a connector to HMDB metabolites.
conn
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In many cases it would be useful to see what reactions and subsequent genes are related to the metabolites in FlyMet. This way we could link back to FlyAtlas and see if upregulated metabolites are ass…
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Hello, I'm running the H2cal function in the context of phenotype treatment for a GWAS analysis as follows:
```
cat_h2cal 80%), are 0. However, some metabolites with a pretty high 0 frequency (…
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The model recon2.v2.xml (in etc/backup/sbml/recon2.v.02 folder) is the first model where annotations have been encountered. Thy do contain important information such as CheBI, KEGG, and PubChem ids, a…
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Assuming we have a list of matched metabolites, merge 2 models via a common compartment
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Hi
Could you please as there is no possiblity to use adonis() again? Should be updated to adonis2().
```
dist.bray.intes.log
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Hi,
I am having huge issues while running the iscope. I have a set of models created with m2m recon and then the pgdb files were compiled into a sbml with the function [metage2metabo.sbml_managemen…
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Latest GPML for [pathwayPA165111375](https://www.pharmgkb.org/pathway/PA165111375) is obsolete.
Use this instead: [PA165111375-new.gpml](https://drive.google.com/a/pharmgkb.org/uc?export=download&id=1…
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Most of the species contain annotations to the secondary ChEBI metabolites.
For instance in model `iAB_RBC_283`.
```
…