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Currently only "soft" labels are provided: could this be an ROI at all? Then we load the soft-labelled ROIs into the GUI and play with the ROI criteria on a dataset by dataset basis.
We should also …
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It'd be really useful if there were support for lists of tiff files that are individual images rather than image stacks. Doing the conversion manually can be very time consuming, even on 3000 frames. …
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This isn't really an issue, but wanted to let you know that I ran your algorithm on the neurofinder datasets and uploaded the results. We ran it with all the defaults but no registration or deconvolut…
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Most datasets are around ~1pix per micron, but the Losonczy lab ones are ~2pix per micron.
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I think they are flipped, is this true?
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Our handling for username links and repo links needs some work. For example, passing a string `@name` yields a GitHub link and `name@host.com` generates a mailto link, but a bare string creates an int…
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I tweaked [this example notebook (for the neurofinder challenge)](http://nbviewer.ipython.org/github/codeneuro/neurofinder/blob/master/notebooks/creating-images-and-sources.ipynb) to include padded bl…