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cortex-lab
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Suite2P
Tools for processing 2P recordings
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xy shift of reference image
#192
ruitpeixoto
opened
1 week ago
0
Neuropil fluorescence calculation
#191
juliadode
opened
1 month ago
0
Suite2p on mac
#190
TaliVas
opened
7 months ago
0
Save motion corrected tiffs
#189
simonweiler
opened
9 months ago
0
Optimal tau value for GCaMP8m
#188
msoheib
opened
11 months ago
1
Transposing F matrix in spike deconvolution
#187
XuanweiLi
opened
1 year ago
0
multiplane_parallel in an HPC (Slum)
#186
gmaggi
opened
1 year ago
1
contiguous scanning ROIs
#185
frikyng
closed
2 years ago
1
combine sbx files
#184
smilingtoad
opened
2 years ago
1
tau value for GCaMP8
#183
immj22
opened
2 years ago
2
deconvolution_standalone2 not standalone
#182
street-grease-coder
opened
3 years ago
0
GUI error
#181
szocs93
opened
3 years ago
0
saving registered uint16 data
#180
poherron
opened
4 years ago
0
Cannot set up batch processing
#179
sarahapark
opened
4 years ago
0
Enquiry regarding diameter of ROI
#178
xwchia
closed
4 years ago
1
Interpreting Deconvolution Results
#177
dba91
opened
4 years ago
4
Merging ROIs in suite2P matlab version
#176
suyashh94
closed
4 years ago
1
Input to Suite2P
#175
Sabermea
opened
4 years ago
0
using "look_one_level_down" doesn't use "bad_frames.npy"
#174
hwpdalgleish
closed
4 years ago
0
running suite2p with GUI on GPUs
#173
vickerse1
opened
4 years ago
1
Error in reg2p: array exceeds maximum array size preference
#172
ghost
closed
4 years ago
0
"NameError: name 'shutil' is not defined, line 231 "shutil.copy(classorig, classfile)" in "roi_detect _and_extract(ops)
#171
vickerse1
opened
5 years ago
0
Undefined function or variable 'Fbase'.
#170
chunyueli
opened
5 years ago
0
NameError: name 'ndimage' is not defined
#169
eskuebler
closed
5 years ago
0
Python executable pointing to python2
#168
kvoit
closed
5 years ago
1
Fixed bug in GetRandFrames...
#167
sylviaschroeder
opened
5 years ago
5
bug in GetRandFrames() due to reshape()
#166
MikaDia
opened
5 years ago
7
Registration and Example data
#165
elgutierr
closed
5 years ago
4
new_main broken
#164
suyashh94
opened
5 years ago
1
Missing frames
#163
OmriG87
opened
5 years ago
1
Redefine channel order
#162
OmriG87
closed
5 years ago
2
compare more than two sessions with registers2p?
#161
MariangelaP
opened
5 years ago
3
Align across planes
#160
sylviaschroeder
closed
5 years ago
0
Correct values for ops0.sensorTau?
#159
PhantomSpike
closed
5 years ago
4
Change the brightness of the mean image in GUI
#158
PhantomSpike
closed
5 years ago
6
Deconvolution problems
#157
horsto
opened
5 years ago
4
How to tweak ROI refinement process
#156
lachioma
opened
5 years ago
3
generate target frames
#155
annie2013
closed
5 years ago
2
loading tiff files
#154
annie2013
opened
5 years ago
3
Question on Rigid vs Non-rigid Registration
#153
danachang
opened
5 years ago
1
Data Format Questions on Image Registration
#152
danachang
opened
5 years ago
20
Option to turn off baseline estimation and detrending?
#151
naomicxia
opened
5 years ago
3
Load ScanImage File
#150
cmketchmark
opened
5 years ago
6
OASISpreprocess returns baseline-subtracted calcium instead of the baseline?
#149
synapticlee
opened
5 years ago
1
Error while loading proc files in registers2p
#148
suyashh94
opened
5 years ago
11
Undefined function or variable 'codes'
#147
JakeHeffley
closed
5 years ago
0
Processing extracted red channel
#146
kameronclayton
closed
5 years ago
1
Running more iterations for cell extraction
#145
cmketchmark
closed
5 years ago
2
add dendrites/boutons detection mode
#144
marius10p
opened
5 years ago
2
update cell detection algorithm to incremental version
#143
marius10p
opened
5 years ago
1
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