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Hi there--fantastic package! Really love its approach.
I'm just going through the vignette and have noticed that the gene set scoring functions may have changed since the vignette. I'm hoping to ge…
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Hello,
Thanks for this very user-friendly package!
I was generating frequency Heatmaps using the heat_freq() function and I noticed that the sender and receiver cell types are ordered alphabetical…
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TODO
## Description
**Q: What is the name of the feature?**
A:
**Q: What does this feature enable the user to do?**
A:
**Q: What information must the user provide to use the fe…
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Hello Prof. Yu,
I find your clusterProfiler (http://yulab-smu.top/clusterProfiler-book/) a useful tool and tried to follow the tutorial.
Since I am working on the gut microbiome and have KEGG pathwa…
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I've recently started using your [Appyter for Independent Enrichment Analysis](https://appyters.maayanlab.cloud/Independent_Enrichment_Analysis/) to analyze the Enrichr catalog with a costume backgrou…
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During the Curation Cafe (2020-01-30); we found quite some (old) PWs which are "annotated lists". Do we want to keep these, or should we make this data available in another manner? Quite some of these…
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Reading to provide background information about existing large gene set curation projects and how they are used in enrichment analyses to improve the interpretation of large genomic datasets.
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Even if the inclusion is network-based, this has been asked several times
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library(DESeq2)
a