-
I am using Hippos-genref to identify finger print interactions in COX-2 (PDB: ID 5IKQ). I am only using two residues (TYR 353 and SER530) for the input. The result's bitstring is 00100000000000. Accor…
-
In the page https://gpcrdb.org/signprot/matrix/
when selecting **more than 20** structures to be showed, the **lateral legend** will show _packed_ names and aminoacids (horizontal packing);
when s…
-
Hello, I will be conducting molecular dynamics for several protein-ligand complexes. Is it possible to calculate the interaction energy between the protein and the ligand for individual simulation ste…
-
请问protein_protein_interaction中“Multimodal Pre-Training Model for Sequence-based Prediction of Protein-Protein Interaction“这篇论文的代码会在什么时候发布?
-
I was thinking of using DIPS-Plus for training a classifier for protein-protein interaction (I confess I have little experience in ML, any advice welcome).
The database describes the pairs based on t…
-
This issue contains monthly updates to an automatically ranked list of PubMed papers as candidates for curation in the Bioregistry. Papers may be relevant in at least three ways:
(1) as a new prefix…
-
## 🐛 Bug
This sample has many bugs, if you just try to run it, I want to propose the following fixes:
## To Reproduce
Steps to reproduce the behavior:
1. just try to run it and many exceptio…
-
Hi! I'm sorry to bother you again.
I used your new tutorial to estimate the metabolite abundances and got the metabolite-protein interactions results using LIANA+. That helps me a lot.
But I have so…
-
Hi
I'm trying to use dMaSIF for interaction prediction between proteins (taking a target and finding the best binder in a large collection of potential binders)
At the moment, I process both bin…
-
http://doi.org/10.1002/minf.201600045 (_edited with link_)