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PaddlePaddle
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PaddleHelix
Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集
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UFFTYPER: Unrecognized atom type: Cu
#360
Yaotian666438
opened
2 days ago
0
Resolving Error in 'run_infer.sh' Script Due to Duplicate 'bfd_database_path' Argument
#359
davidwongmedinfo
opened
1 week ago
1
Added environment.yaml for conda environments and def file for creating singularity/apptainer image
#358
jscgh
opened
1 week ago
1
Fix errors.
#357
leaves520
closed
2 weeks ago
1
helixfold3 how to set constraints
#356
kehan777
opened
2 weeks ago
0
gem 预训练权重问题
#355
reese-lee1
opened
3 weeks ago
5
HelixDock: 请问可否提供下helix dock预训练对接数据中的蛋白质结构部分
#354
fengshikun
closed
3 weeks ago
1
Error in HelixFold3: ref_atom_name_chars < 64
#353
ebettler
closed
2 days ago
4
protein/dna预测任务，无限等待
#352
Shi-YangWang
closed
1 month ago
0
Error in HelixFold3: TemplateAtomMaskAllZerosError: Template all atom mask was all zeros: 3jxv_A. Residue range: 11-115
#351
ggokturkk
closed
2 weeks ago
2
Add polymer terminal atom.
#350
leaves520
closed
2 months ago
0
Add polymer terminal atom.
#349
leaves520
closed
2 months ago
1
Ranking score calculation?
#348
hallelujahxn
opened
2 months ago
0
docs: add Japanese documentation files
#347
eltociear
opened
2 months ago
2
HelixFold3: Can't solve the UnpicklingError issue
#346
YoshitakaMo
closed
2 months ago
1
Carboxyl terminus of the protein lacks an oxygen atom.
#345
Garhorne0813
closed
2 weeks ago
1
AttributeError: module 'paddle.fluid.core_avx.ops' has no attribute 'fused_gemm_epilogue'
#344
qfduli
opened
2 months ago
0
HelixFold3 predicts unreasonable structures
#343
Garhorne0813
opened
2 months ago
2
FatalError: `Process abort signal` is detected by the operating system. :(
#342
melyssacheung
opened
2 months ago
0
CUDA and cuDNN version mismatch HelixFold3
#341
ahmedselim2017
closed
2 months ago
2
Hf3 fix: SM conf gen and license
#340
RyanGarciaLI
closed
2 months ago
0
ssDNA won't work
#339
jkosinski
closed
2 months ago
2
How to include post-translation modifications?
#338
jkosinski
opened
2 months ago
1
demo_6zcy: ccd prediction (demo_6zcy.json) by helixfold3 is ok, but smiles (demo_6zcy_smiles.json) failed
#337
Samuel-gwb
opened
2 months ago
2
helixfold3 runs out of memory
#336
Garhorne0813
closed
2 months ago
3
Apache 2 license missing
#335
igor-krawczuk
opened
2 months ago
1
Server connectivity from USA
#334
sokrypton
opened
2 months ago
3
gem problem
#333
reese-lee1
opened
2 months ago
1
Regarding the download command issue
#332
LUDENGZHEN
opened
2 months ago
2
About HelixFold3 PTMs
#331
v-shaoningli
opened
2 months ago
2
keyerror
#330
reese-lee1
closed
2 months ago
2
feat/docs/cases: Covalent Bond Input
#329
YaoYinYing
opened
2 months ago
4
fix unzip checkpoint shell script
#328
RyanGarciaLI
closed
2 months ago
0
On the issue of Scripts bash commands
#327
LUDENGZHEN
closed
2 months ago
2
Clarify HelixFold3 license
#326
agitter
closed
2 months ago
1
PR-1: Hydra-Powered YAML Configuration and run as Pip module
#325
YaoYinYing
opened
2 months ago
2
HelixFold3 的测试数据集与AF3对齐的问题
#324
JinyuanSun
opened
2 months ago
1
Any Ideas about Covalent bond btw ligand and protein residue?
#323
YaoYinYing
closed
3 months ago
2
Posebusters time split
#322
bfabiandev
closed
3 months ago
2
Hydra-Powered YAML Configuration and Enhanced File Support in HelixFold3
#321
YaoYinYing
closed
2 months ago
4
PaddleHelix工具集应用
#320
zhangxianhe666
opened
3 months ago
1
Hydra configuration for HelixFold3
#319
YaoYinYing
closed
3 months ago
1
HelixFold3中ccd_preprocessed_etkdg.pkl.gz文件读取问题
#318
lbsskt
closed
2 months ago
2
Fix cmd bin missing and add more demo
#317
RyanGarciaLI
closed
3 months ago
0
update readme and demo result
#316
RyanGarciaLI
closed
3 months ago
0
helixfold3 “FatalError: `Process abort signal` is detected by the operating system.”
#315
Charlesjc-lab
closed
2 months ago
2
set fp32 by default, add demo result
#314
RyanGarciaLI
closed
3 months ago
0
HelixFold3代码存在各种bug
#313
Maikuraky
closed
2 months ago
3
disable no MSA mode
#312
RyanGarciaLI
closed
3 months ago
0
[Important] search MSA by default
#311
RyanGarciaLI
closed
3 months ago
0
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