PaddlePaddle PaddleHelix issues

PaddlePaddle / PaddleHelix

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

Apache License 2.0

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issues

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Usage problem

#299 ActionBeam opened 1 week ago
2
add drug-drug-interaction

#298 yeyeahh opened 2 weeks ago
1
add drug-drug-interaction

#297 yeyeahh closed 2 weeks ago
1
add drug-drug-interaction

#296 yeyeahh closed 2 weeks ago
1
pip install paddlehelix fails due to sklearn deprecation

#295 AndyLiu-121 opened 3 weeks ago
0
HelixFold在Ultra-Long Monomer Protein Demo上推理出错

#294 zepingWww opened 3 weeks ago
0
Helixdock fix requirements and dataset config issue

#293 Noisyntrain closed 1 month ago
0
Posebuster dataset demo in HelixDock

#292 ivandon15 opened 1 month ago
1
add environment requirements

#291 Noisyntrain closed 1 month ago
0
Merge pull request #288 from PaddlePaddle/helixdock

#290 Noisyntrain closed 1 month ago
0
Requirement.txt for helixdock and examples

#289 lifecodetest opened 1 month ago
4
Update README and latest news

#288 Noisyntrain closed 1 month ago
0
Update README.md

#287 Noisyntrain closed 1 month ago
0
Update README.md

#286 Noisyntrain closed 1 month ago
0
Update README.md

#285 Noisyntrain closed 1 month ago
0
HelixDock init commit

#284 xiaoyao4573 closed 1 month ago
0
Fix dependency name for scikit-learn in setup.py

#283 linkedlist771 opened 1 month ago
2
creating HelixDock directory

#282 Noisyntrain closed 1 month ago
0
hiv和muv数据集

#281 zoey731 opened 1 month ago
1
pip install paddlehelix报错

#280 wdi-nancy opened 2 months ago
2
运行helixfold-single-inference.py 报错

#279 Linzy19 opened 2 months ago
1
Update README_train.md

#278 BeingGod opened 3 months ago
0
运行脚本train_cls.py报错，AttributeError: type object 'paddle.fluid.libpaddle.VarBase' has no attribute '__getitem__'

#276 ShaunZhang7 opened 6 months ago
0
运行脚本train_cls.py报错：AttributeError: type object 'paddle.fluid.libpaddle.VarBase' has no attribute '__getitem__'

#275 ShaunZhang7 opened 6 months ago
0
加载GEM pretrain model提示模型shape和权重shape不一致

#274 wjybill opened 6 months ago
1
paddlehelix安装问题

#273 ShaunZhang7 opened 7 months ago
4
Get distogram prediction from Helix-single

#272 ShuhaoGithub opened 7 months ago
0
Add a new Equivariant GNN named ViSNet

#271 yusowa0716 opened 7 months ago
1
权重

#270 luyao-cv opened 7 months ago
0
运行tutorial的时候出现与cuda有关的error

#269 wjybill closed 8 months ago
1
ask for the generation of processed.pkl in the geomGCL

#268 Yanara-Tian opened 9 months ago
1
Upload the codes of paper CamE

#267 quqxui closed 9 months ago
1
how to inference with DCU

#266 lijxgit opened 9 months ago
0
minor update

#265 LihangLiu closed 11 months ago
1
运行JTVAE的代码，preprocess没有问题，训练代码报错，使用的是你们官方提供的数据集

#264 Skyright7 opened 11 months ago
1
add giant

#263 agave233 closed 11 months ago
0
Encountered ImportError when using HelixFold-Single.

#262 ZheJiangLabCode closed 5 months ago
1
when will Code for "Multimodal Pre-Training Model for Sequence-based Prediction of Protein-Protein Interaction" be released?

#261 linuxonly801 opened 1 year ago
0
使用命令 pip install --upgrade git+https~ 时候会出现sklearn is depreciation use scikit-learn instead

#260 ikunpy opened 1 year ago
0
在使用paddlehelix安装时，sh scripts/build.sh，会出现make: *** makefile。停止。的错误

#259 ikunpy opened 1 year ago
0
Fix training because of 0-D Tensor.

#258 Xreki closed 1 year ago
0
Add flash attention option for fused_gate_attention

#257 JamesLim-sy closed 1 year ago
0
GEM does't work

#256 eshinesimida opened 1 year ago
2
Remove trailing whitespace

#255 zyckk4 closed 1 year ago
0
Support 6.6k+ extra long protein infer

#254 GuoxiaWang closed 1 year ago
0
GEM pretrain model.

#253 karthikjetty opened 1 year ago
1
Could you please provide the CASP14 test set which you evaluated on?

#252 JoeyL12138 closed 1 year ago
2
Optimize the use of getitem (slice) and einsum.

#251 Xreki closed 1 year ago
0
Optimization for _multiply and _multiply_np in QuantAffine

#250 JamesLim-sy closed 1 year ago
0
Get Embedding Layer

#249 karthikjetty opened 1 year ago
2