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Documentation to setting up instances of KG on AWS: https://github.com/clinical-biomarkers/biomarker-partnership/tree/main/supplementary_files/documentation
Goal: Create knowledge graphs and cyph…
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[ASAP-0015381](https://github.com/StructuralGenomicsConsortium/CNP25-CHIKV-nsP3-Macrodomain/assets/133207721/fca7cc25-1a3e-4edc-8abf-217449838c4c) is One of the ASAP potent inhibitors vis SARS-CoV-2-N…
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Heyy,
I've already predicted several protein structures with Alphafold2.0 using a colab-notebook. But I have to predict around 100 protein structures and so I've heard about Omegafold wich can pred…
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Hi all,
First of all, I apologize if this is not the proper place to ask usage questions.
Now, to the questions:
1. I have several structurally similar proteins (wild-types) and I am interest…
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I installed localcolabfold and copied HighFold git repo into my localcolabfold.
So that my localcolabfold git repo looks as
![Screenshot 2024-06-25 at 5 29 04 PM](https://github.com/hongliangduan/…
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Dear author,
Thank you very much for your great contribution to the community and I am very interested in your research! However, it is a great pity that when I reproduced your work, I found t…
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Dear team,
Thank you very much for providing Open-ComBind as a command-line tool for docking pose selection. I have results from a previous docking job using GNINA with CNN-scoring. I have 10 prote…
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I strictly followed the steps provided in the README file. However, I encountered an issue where the reconstruction protein model appears to have a hollow structure, whether w/wo gt-pose:
![image](ht…
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Hi, I am an Honours student and I'm planning to create my own comparison between foldclass and foldseek searches across similar databases for the protein I'm researching. Currently I cloned the reposi…
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@milot-mirdita @martin-steinegger
Hi, thank you for developing such an amazing tool. I had some problems using foldseek.
1、I often cluster protein structure datasets using the following command…