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## The R for Mass Spectrometry Initiative
Authors/developers: @lgatto @sgibb @jorainer
The objectives of the *R for Mass Spectrometry* initiative (https://www.rformassspectrometry.org/) are…
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Dear neogilab
I have read the paper, the result is very interesting.
Could you provide the Fractions data for me to test the result?
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input
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
-Note: The package is currently stored on the Lab github but I do the maintenance and…
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In the following issue #671 we discussed the major changes for SDRF specification during the next release 1.1. One of them, is the extension of SDRF for metabolomics.
> **GOAL**: The aim of adapti…
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## AlphaPept, a modern and open framework for MS-based proteomics
Link to the paper: https://www.biorxiv.org/content/10.1101/2021.07.23.453379v1.full
Citation in manubot format: [@DOI:10.1101/20…
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For multiple genomic data, most of the information can be stored as matrices. The most striking example is with SNP data, which can be stored as matrices with thousands to hundreds of thousands of row…
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I have proteomics data from three cell lines, each of which was exposed to two conditions (control and a drug). I've followed your vignette through normailzation and differential enrichment analysis, …
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Use this thread to discuss potential figures. I think we need about one figure per section depicting the key concept from that section.
@Arokiarex is drafting a figure for the quantitative strateg…
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Hello,
I have a question about measuring the concordance between bulk and sc DE tables. In your script, you used 6 different methods to generate DE tables when the input is bulk RNA-seq data. Whic…