-
Use this thread to discuss potential figures. I think we need about one figure per section depicting the key concept from that section.
@Arokiarex is drafting a figure for the quantitative strateg…
-
Hello,
I am trying to use xCell with Proteomics data, before using it I normalized and imputed the data. I also checked the number of genes, the tool requires minimum 5000 genes, my file contains …
-
I have proteomics data from three cell lines, each of which was exposed to two conditions (control and a drug). I've followed your vignette through normailzation and differential enrichment analysis, …
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/AliYoussef96/LimROTS
Confirm the following by edi…
-
For multiple genomic data, most of the information can be stored as matrices. The most striking example is with SNP data, which can be stored as matrices with thousands to hundreds of thousands of row…
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/Lu-Group-UKHD/SmartPhos
Confirm the following by …
-
- [ ] [Correlated gene modules uncovered by high-precision single-cell transcriptomics](https://www.pnas.org/doi/abs/10.1073/pnas.2206938119)
- [x] [Dynamics of single-cell protein covariation during…
-
**Interop Contact**: Jack DiGiovanna
**Active in 2021**: Active,
**Researche**r: Wilson McKerrow [PDC (CRDC), GDC (CRDC), and GTEx (AnVIL) data]
## Analysis Question
The Fenyo lab is studying how re…
-
Hi Mike,
I am trying to visualise tide-percolator output using Limelight. I ran the following commands as specified in the README on the `pep.xml` file:
```
perl -p -i -e 's/num_tol_term=\"\"/num…
-
There is several tutorials that would need some ❤️
Most of the changes are newcomer-friendly 😄
We created a checklist of the possible contributions on the tutorials: https://galaxyproject.github…