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# Abstract
Proteomics is a broad research field embracing a wide range of alternative experimental and computational approaches. This led to the development of a zoo of single- and multi-purpos…
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Hi,
I am executing the portal_client tool (with my iHMP username and password) to download the files using a manifest file as follows:
portal_client -m hmp_cart_e0473170e2.tsv --endpoint-priority FA…
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For multiple genomic data, most of the information can be stored as matrices. The most striking example is with SNP data, which can be stored as matrices with thousands to hundreds of thousands of row…
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I install MaxcotPercolator following https://www.sanger.ac.uk/science/tools/mascotpercolator. I try to run MascotPercolator on my Linux computer. However, it cannot work well and warn `No modifiaction…
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I am quite interested in the method and would like to repeat the analysis to further understand it.
I found the normalized CPTAC data from the original publication, but I am not sure whether that wa…
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The current "dev" version of the workflow fails for me on the self-test data. The log output is included below (as part of "pipeline_report.txt") , but the cause of the problem isn't apparent from it.…
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@timosachsenberg , Oliver said you might have some Galaxy workflows that used the output of CTDConverter?
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# DeepScore: Community curated scoring, supercharged with AI
![EJ2PqRjXsAIQrb6](https://user-images.githubusercontent.com/16521288/195572456-62ab95bf-d0bc-4f70-b5e4-272cb509eff4.jpeg)
(Image taken f…
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# Abstract
Methods to represent multiple spectra
Spectral library searching offers a sensitive yet fast method to match spectra from mass spectrometry-based proteomics experiments. The techn…
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#### Summary:
When running the same stan model in parallel on a high number of datasets on multiple cores, using BiocParallel package with MulticoreParam back-end, I get an error message linked to sh…