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I install MaxcotPercolator following https://www.sanger.ac.uk/science/tools/mascotpercolator. I try to run MascotPercolator on my Linux computer. However, it cannot work well and warn `No modifiaction…
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ND4BB data = @mkoatwork and @agiani99
ReSOLUTE = @ulo and @danidi Proteomics data acquired, tbd at next consortium meeting in 2 weeks, then 30 days timeline (total 6 weeks) -> should be early July
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# DeepScore: Community curated scoring, supercharged with AI
(Image taken f…
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For multiple genomic data, most of the information can be stored as matrices. The most striking example is with SNP data, which can be stored as matrices with thousands to hundreds of thousands of row…
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could you upload the biophysical features for 20 standard amino acids?
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It would be nice to have links to the most relevant repositories and resources related to `sdrf-pipelines` in the `README.md`. e.g. to the https://github.com/bigbio/proteomics-metadata-standard repo.
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### Title
Proteomics Identification Ontology
### Short Description
The Proteomics Identification Ontology (PRIDE ontology) provides a model for describing, sharing and integrating of proteom…
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Future Use cases:
- [ ] Fin the database or repository that fits my need. For example, I have a dataset and I want to know
is the best option for my needs. For example which of the ProteomeXchan…
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We discussed some basic alterations to the python functions that are described in the `doc-update` branch here:
https://github.com/PNNL-CompBio/coderdata/blob/doc-update/README.md
These changes e…
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**Interop Contact**: Jack DiGiovanna
**Active in 2021**: Active,
**Researche**r: Wilson McKerrow [PDC (CRDC), GDC (CRDC), and GTEx (AnVIL) data]
## Analysis Question
The Fenyo lab is studying how re…