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Lims Issue
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For definitions of headings below see [Basic Concepts](https://atlas.scilifelab.se/infrastructure/lims/basic_concepts/).
**Work Flow:** WGS PCR free v5
**Protocol:**…
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Weronika and I discussed preliminary results and possible conclusions from the quantseq analysis on 16/08/21.
**Objectives from the Quantseq Analysis**
1. Show that the most common isoform length …
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**New term details**
This term will be for the MInAS project's proposed `ancient` extension.
```
Term name - Library Concentration
Structured comment name - lib_concentration
Definition - Conce…
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I would like to request a galaxy tool based on either the geNorm or NormFinder (preferably geNorm) algorithms which serve to determine the most stable housekeeping genes for qPCR analysis.
Both are p…
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Lims Issue
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For definitions of headings below see [Basic Concepts](https://atlas.scilifelab.se/infrastructure/lims/basic_concepts/).
**Work Flow:** TruSeq DNA PCR-free Library Pr…
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The code for the insertion and deletion construct plots is very hard to follow, in `combine_terminator_construct_qPCR_and_design_figure.R`, this part:
```
insertion_construct_plot
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# [Bunyavirales - order](https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=1980410&lvl=3&keep=1&srchmode=1&unlock) (Phylum:Negarnaviricota; Subphylum:Polyploviricotina; Class:Elli…
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Currently, the guide promotes using `sampleSizeValue` and `sampleSizeUnit` to report read count information at the sample level. However, this conflicts with the recommended use of those fields to cap…
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Current edition of tidyqpcr works for SYBR safe experiments, i.e. 1 probe in 1 colour per well. The other major approach to qPCR is hydrolysis probes (TaqMan), which has multiple probes measured in di…