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```r
library(rhdf5)
h5createFile("whee.h5")
h5write(LETTERS, "whee.h5", "stuff") # okay
h5write(c(NA_character_, LETTERS), "whee.h5", "more_stuff")
## Error in if (chunk_size > 2^32 - 1) { :
## …
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In my set up, `shar/sel0/mpro1/Plate_Pb210/011835.h5` has a "tt" field that is an ExternalLink to the "tt" field of `tt/sel0/mpro1/Plate_Pb210/011835.h5`. If the target is a symlink, h5py cannot reso…
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Hi
Sorry, I'm unfamiliar with converting between MuData and R format.
I am unable to load my h5mu data in. I keep getting "Error in h5checktype(). The provided H5Identifier is not a dataset ide…
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Hello,
This issue is traced back from [my original issue posted for Sleuth](https://github.com/pachterlab/sleuth/issues/175).
The HDF5 output from Kallisto cannot be read by rhdf5 or Sleuth, alt…
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Hi, i need help to use the parsing function of cmapR
I was testing the cmapR library by following the [tutorial](https://bioconductor.org/packages/release/bioc/vignettes/cmapR/inst/doc/tutorial.htm…
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Hello,
When I try to create a snap object with the following command
```
x.sp = createSnap(
file=c("RJ_ATACseq_from_cellranger.snap"),
sample=c("Pancreas_190724"),
num.cores=1
)
```
it …
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Weekly accomplishments:
- Proficiency: last week analysts succeeded in eco flows analysis in R and ran hspf 5.3.2 from command line.
- Concepts covered:
- basic understanding of land seg, river s…
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sleuth_prep seems to always error with "subscript out of bounds" during step "normalizing est_counts". I'm trying this on my own data since, as others have pointed out, the link to the sample data is …
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Hello,
Do you know when a new release will be released? Version 0.30.0 is not working as it is.
The error "Error: package or namespace load failed for ‘sleuth’:
object ‘h5write.default’ is not exp…
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https://github.com/Bioconductor/BiocStickers/blob/master/template/inkscape_template.svg
cannot be read nor imported using Inkscape 0.92.3 (2405546, 2018-03-11) on Ubuntu 18.04 LTS
Display in a b…