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### Is there an existing module for this?
- [X] I have searched for the existing module
### Is there an open PR for this?
- [X] I have searched for existing PRs
### Is there an open issue …
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#### Introduction
I am a new PhD Student at the Walter and Eliza Hall institute in Melbourne, Australia. My project is based around methods and tools for the analysis of DNA methylation in long reads…
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I think we need to create two specific children of this term - there are two different methyltransferase activities involved here, one acting on the first nucleoside and one acting on the second nucle…
sjm41 updated
5 months ago
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Lack of an existing "somatic event ID" to tie DNA and RNA data together...eventually methylation data, etc. This actually surfaced today as a primary complaint from another project, as when they do mo…
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I think that make_reference ran successfully (although it claims a 'fatal error: unable to reallocate enough memory' near the end of the log), however I am having trouble getting mapping_variant_calli…
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So, I performed direct RNA sequencing on nanopore and got fast5 files for them. When I do tombo resquiggle, should me reference fasta file by DNA or RNA sequence in fasta?
For instance, if I sequen…
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| Name | Department/Program | Experties/Interests |GitHub ID |
| ------------- | ------------- | ------------- | ------------- |
| Annie Cavalla | Bioinformatics | Cancer genomics, single cell tra…
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T cell subsets are likely best distinguished w/ ATAC-seq data so we should track down some.
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| Name | Department/Program | Experties/Interests |GitHub ID |
| ------------- | ------------- | ------------- | ------------- |
| Arjun Baghela | Bioinformatics | Immunology & Transcriptomics | …
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Hi Dr. Wang,
I have just read your paper "A mouse model with high clonal barcode diversity for joint lineage,
transcriptomic, and epigenomic profifiling in single cells" and fairly interested in the…