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@k-florek @fanninpm @erinyoung @tives82 @DrB-S
I have been using Cecret for all things SARS-CoV-2 and our research lab just started to work up a NGS methodology for Human Norovirus sequen…
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Dear @joicy,
Could I know where to find `https://github.com/joicy/SARS-Cov-2-Africa-dashboard` repository?
Thanks.
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I worked a bit on the labelling matching with ENA / NCBI as I had a lot of mismatch issues with the development of the FAIR Data Station. I forked the repo and did an analysis on the terms in MIxS and…
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I suggest using the poreCov pipeline as the backend for SARS-CoV-2 wastewater lineage deconvolution from nanopore long reads. You already added `freyja` ( #274 #270), which is great as the current com…
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There seems to be a very new and very interesting branch of XEC found by @FedeGueli 。
From branch 13 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/2088
XEC+G2060A(Orf1a:A599T)+C…
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**Is your feature request related to a situation you're trying to understand with microCOVID? Please describe.**
A clear and concise description of the situation you're trying to understand by using …
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I've noticed that while the release is ongoing for SARS-CoV-2, the new dataset is selectable, but when you click on it you get a 404 due to README and CHANGELOG not being available.
This se…
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From branch 18 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1771
sub branch of #2668
KP.2.3+del21653_21655(S:S31-)+C28714T+A6184C(Orf1a:R1973S)+A29647G+C21691T,G22132T,A22995…
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This issue collects examples of custom styles used in the SARS-CoV-2 project that we might want to support.
- `.custom-block.tip`: See [here](https://covid19.galaxyproject.org/genomics/global_platf…
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Usher SARS-CoV-2 masks quite a lot of sites (I think around 270, i.e. almost 1% of genome) based on this vcf: https://raw.githubusercontent.com/W-L/ProblematicSites_SARS-CoV2/master/problematic_sites_…