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Hello,
I am having an issue getting the Giotto (v1.0.4) python environment working while running on a linux environment. I have tried using both `installGiottoEnvironment()` and creating the conda en…
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**Introduction of yourself:**
Bioconductor developers involved in the Chan Zuckerberg Initiative (CZI) to develop collaborative computational tools for the Human Cell Atlas (HCA).
**Should it be…
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the word lists are different from wordle.
if helpful, here's the wordle list:
```
valid_guesses = ["aahed","aalii","aargh","aarti","abaca","abaci","abacs","abaft","abaka","abamp","aband","abash",…
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Hi Nick,
Thanks for this great package! Very useful.
I am running into an issue right now, wanting to group my data differently using expression2List.
I have several metadata columns, and stra…
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First of all, thank you for Scanorama! Pretty impressive package.
We work with CITEseq and examine patient samples longitudinally over multiple time points. For each time point we generate an RNA c…
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Hey,
I am using scran v1.16.0 (installed from the conda-forge/bioconda channel) and noticed inconsistent behavior for the function `findMarkers` with `block=plate` and `lfc=0.5` when using `direct…
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Dear Beate,
Congratulation on your last preprint, it has provided me and the whole single-cell community with very clear guidelines to improve our scRNA-seq pipelines. In this regard, I would kindl…
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Hi Constantin,
first of all congrats and thanks for this nice and very useful package.
I would like to ask two questions:
1)
I was wondering whether there is (or you plan to add) an option t…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/kieranrcampbell/cellassign
Confirm the following …
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Hi, I’m not sure whether it is appropriate to post issue in this repository.
I'm a user of Seurat (https://github.com/satijalab/seurat) which uses future framework to implement multi-threading job…
QqQss updated
4 years ago