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Potential new terms for uterine muscle and epithelial cell types: https://www.nature.com/articles/s41588-021-00972-2
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When executing ti_monocle_ddrtree on
> "dynbenchmark/derived/01-datasets/synthetic/dyngen/1/dataset.rds"
with:
```
## Compute Inferred Trajectory
trajectory %
add_prior_information(st…
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Is there a way to extract/subset specific values from the generic list-of-list (not HCA data) that meet a particular condition?
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Project Title: Structural Remodeling of the Human Colonic Mesenchyme in Inflammatory Bowel DiseaseProject Short Name: HumanColonicMesenchymeIBDProject UUID: f8aa201c-4ff1-45a4-890e-840d63459ca2Wrangle…
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Hello,
I used Symphony to map two single-cell RNAseq queries to my harmony-integrated reference (made using the modular approach presented on Symphony Github). I used queries that were previously a…
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As people dig deeper into this dataset, they invariably come across interesting subpopulations below the granularity of the existing resolution. This issue is to track them.
* IgJ+ subpopulation of…
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Hi,
Thank you very much for developing these great packages. Could you elaborate why the following warning?
`Warning message:
In run.CSIDE.general(myRCTD, X1, X2, barcodes, cell_types, cell_typ…
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Hi,
I want to use ACTINN to annotate my mouse 10x data, but failed with the following error:
Cell Types in training set: {'Granulocyte': 0, 'Cardiac Muscle': 1, 'Hepatocyte': 2, 'Stromal cell': …
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Title: Please edit the title to add the name of the paper after the colon.
# General Information
## Please paste a link to the paper or a citation here:
Link: https://www.nature.com/article…
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