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Using the alternative id directly on the url does't resolve to any page.
When terms are merged, one id is kept as main, the other as alternative (in obo file 'id' and 'alt_id' respectively). Using the…
mmc46 updated
8 years ago
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_From @dosumis on June 27, 2017 12:23_
Unlike VFB 1.5, only direct instances are shown in example images for TermInfo
e.g. see 'uniglomerular antennal lobe projection neuron'
Cypher:
```cql
…
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Can we make a plan to migrate domain data from JSON files here to KB.
Example of current state KB
![image](https://user-images.githubusercontent.com/112839/38732109-f1d21e44-3f14-11e8-9912-11bb8…
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Naviely, it looks like this should be fixable by tweaking the regex as here:
https://github.com/VirtualFlyBrain/curation/commit/78b7ae5021432313befcecf62b856b42f8410713#diff-7d40c8f169cf725408ddb5…
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- We need to add a filtering step so that datasets can be embargoed. In pipeline 1, this step is at the OWL export stage. In p2 it should also be between KB and the integration layer.
- The step…
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_From @dosumis on November 15, 2017 10:58_
- [ ] Devise new naming scheme
Current names are of the form:
BU - painted domain JFRC2
IVLP - painted domain JFRC2
BU - painted domain, BrainNa…
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_From @dosumis on November 15, 2017 10:58_
- [ ] Devise new naming scheme
Current names are of the form:
BU - painted domain JFRC2
IVLP - painted domain JFRC2
BU - painted domain, BrainNa…
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For working on improving pipeline scaling, It would be very helpful to have timings for each goal in the dumps Makefile:
https://github.com/VirtualFlyBrain/vfb-pipeline-dumps/blob/master/dumps.Make…
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Right now, the pipeline does not fail if a single CSV fails to load:
https://github.com/VirtualFlyBrain/vfb-pipeline-update-prod/blob/9886334be71368c05dcd730abc29f2a1aef43fb9/process.sh#L47
Note…
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@dosumis
Can you review the basic model:
https://github.com/VirtualFlyBrain/vfb-data-ingest-api/blob/master/vfb_curation_api/database/models.py
In particular, I would be interested in
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