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My experimental data is not whole genome sequencing but restriction site-associated DNA sequencing (RAD-seq), and I would like to know if I can use your software under such conditions.
Thanks again!
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Hi,
Is this method is optimised for detecting cDNA from (pacbio) long-reads based whole genome sequencing?
Thanks.
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“SV calls can be inferred from discordantly aligned reads from whole genome sequencing (WGS) using different algorithms” in the introduction section, I am confused that whether CNV &SV calls from whol…
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Can SCmut be adapted to calling SNVs from scWGS (single-cell whole-genome sequencing)?
Are their any parameter should be changed or we can use it directly?
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Hi,
Could you please inform me how the gc1000.rds and map1000.rds files are generated, or where to download the hg38 GC content and Mappability files for 1 kb whole-genome sequencing (hg38)?
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**Describe the bug:**
The activation command for `fish` fails for me because there is a `(...)` in the pathname, which `fish` tries to run as a command substitution since the command run by `flox a…
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Hi,
I tried to perform whole-genome alignment on genomes containing various sequencing technologies and different assembly qualities. There were no error messages during the software running process…
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Are there any recommended methods to obtain non-modified samples for sequencing (e.g. whole-genome amplification, or something else?)?
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Hello,
What coverage do you recommend to run this tool for Whole Genome Sequencing? Is 30x Normal and 60x Tumor sufficient?
Thanks,
Ahwan
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From Allison Heath and Eric Wenger:
Good morning, quick question on what the Ontology WG recommends for c2m2 OBI id's in several cases where we are not seeing matches.
Kids First data has several…