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Data viewers and apps/methods should be collapsible. One idea is to use the left-hand "gutter" in the narrative canvas for a small grey arrow. Another option would be to roll up the widget on a double…
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- Download genomes of additional Malassezia species (other than malGlo and malSym)
- Use list here [[3]](https://www.ncbi.nlm.nih.gov/genome/?term=txid55193%5BOrganism%3Aexp%5D), download M. pachyder…
mrshu updated
6 years ago
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Your pangenome pipeline has been amazing to work with, and I have a request that I do not believe has been implemented. I am interested in looking at overlapping functionality between genomes, and I'd…
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This ticket #14892 will lead to a lot of changes, so I am trying to split up some sub-issues.
Merge 'GO:0015683 ferric iron transmembrane transport'
into
'GO:0098706 ferric iron import across pl…
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Hi,
I just started using cobrapy to test different bacterial strains growth, however I very unexperienced in this area.
There is a published metabolic model for my bacteria specie, and I eliminated …
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* Download genomes of additional Malassezia species (other than malGlo and malSym)
Use list [here](https://www.ncbi.nlm.nih.gov/genome/?term=txid55193%5BOrganism%3Aexp%5D), download M. pachydermatis,…
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There is some recent work on using of de Bruijn graphs on analysis of pan-genome, e.g. see:
1. http://biorxiv.org/content/early/2014/04/06/003954
2. http://link.springer.com/chapter/10.1007/978-3-319-…
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the command I use to produce BCF is
samtools mpileup -gDf hg19 female.bam male.bam offspring.bam
the colume title of BCF is
#CHROM POS ID REF ALT QU…
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Welcome to Applied Statistics for High-Throughput Biology at the University of Trento. Please use this "Issue" to introduce yourself, using your new Github account.
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Hi,
This is follow-up to twitter conversation with @PeroMHC.
Is the following workflow available in Paladin?
(1) Find ORF in assembled contigs
(2) map amino acid sequences to reference database
(3) Th…