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The file describing the setup should be present at http://www.datacarpentry.org/organization-genomics/setup.md
Maybe we only need one setup for all genomics lessons (something to think about discuss)…
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[Setup](http://www.datacarpentry.org/cloud-genomics/setup/)
What is setup for this section? /if we are covering AWS setup in a separate section, yes?/
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It can be a very frustrating experience to work through the software pages in order to find how to download and install software. More so for novices who don't know what they're looking for. I think i…
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The setup file should preferentially provide version numbers (that are compatible) for the software (where it matters). E.g samtools can vary quite a bit with versions there are combinations with bcft…
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This seems to be in the SWC format. This lesson is midstream in whatever workshop flavor. There should be nothing for the user to download or install. Unless original intent of teaching all on cloud/H…
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@jgoecks @mayfielg @ahwagner : See my notes below. I simply wanted to capture them here and if it's appropriate, move them over to google docs.
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# G2P - Knowledgebase integration
## Abs…
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### Context
This is to define scope and requirements for Search page design iteration.
### Problem or idea
### Relevant Features for Search page
- #### Search by
- Free text Search (Use …
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Hello,
I am new to using IGV tools. I want to use the IGV tool for vcf file visualization on remote linux server.
I tried running 1kg-vcf.html for this purpose.
I have a fasta, bed and indexed b…
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Hi Anvio team
I am performing some comparative genomics analysis (same workflow as #587) and having an issue with anvi-display-pan. I used the following code to perform the pangenomic analysis on m…
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Consider implementing a method on the Group class like "describe" or "ls" which will print whole hierarchy for a given hierarchy depth.