-
Are these the same?
GO:0016971
flavin-linked sulfhydryl oxidase activity
Catalysis of the formation of disulfide bridges.
GO:0015035 | protein disulfide oxidoreductase activity
Catalysis of…
-
Dear crux developers,
I am aware of the option to use _generate-peptides_ command in combination with _--custom-enzyme_ to apply new cleavage rules.
However, I wrote a larger script to generate a…
-
Hi
I was trying out the compare script for te first time and apparently ran into an issue that the "ProteinOrtho5 POFF results" (poff.tsv) was not found, hence it crashed. Is this a file I am suppo…
-
Not sure if this is a bug or not but noticed these while generating the mediKanren indexes. If you run the following cypher in kg2
```
match (n) where n.id =~ '.*,.*' return n.id, n.name
```
you w…
-
while installing the environment, it gave me conflicts.
I have anaconda version 4.8.2
DEF: breakdown of skeletal muscle fibers leading to leakage of muscle contents into the bloodstream; damage t…
-
Hi GO,
I would need a new term to describe resolution of protein-DNA covalent cross-linking. Different proteases mediate this specific activity WSS1 in yeast, SPRTN or FAM11A in human.
Thanks
S…
-
Dear Jon,
Thank for the latest release of **funannotate**. I tried it on _Linum usitatissimum_ genome and almost everything went fine. However, InterProScan search is still running for 10+ days and…
-
Came across this term that seems to describe an experimental condiition rather than a GO BP:
PMA-inducible membrane protein ectodomain proteolysis GO:0051088
'The proteolytic cleavage of transme…
-
This SEP proposes to add a new glyph for inert DNA spacer sequences, generalizing on the concept of an insulator.
https://github.com/SynBioDex/SBOL-visual/blob/master/SEPs/SEP_V022.md
Note that …