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For the sake of better readability, better use
ModuleList (https://pytorch.org/docs/stable/generated/torch.nn.ModuleList.html)
instead of
´exec`
in
https://github.com/giotto-ai/giotto-deep/blob/2…
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Please add a reference to the paper your code is based on. This makes it easier to look up how the algorithm works.
https://github.com/giotto-ai/giotto-deep/blob/2965f49a5653bc51790bc76c66e21f2e5ca3e…
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To compute the model accuracy correctly for dropout use model.eval(), see
https://stackoverflow.com/questions/53879727/pytorch-how-to-deactivate-dropout-in-evaluation-mode
in the code
https://githu…
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Hello Ruben,
I am contacting you because I have noticed something strange happening when I call spatPlot2D(). Basically I have a vector of colors that I would like to use instead of the default on…
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I have different kinds of models that require different input sizes.
I have written a small workaround for that but it would be great to have a proper implementation.
https://github.com/giotto-ai/…
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self.train_epoch is increased by 1 for every batch.
https://github.com/giotto-ai/giotto-deep/blob/2965f49a5653bc51790bc76c66e21f2e5ca3e65d/gdeep/pipeline/pipeline.py#L69
However, it should only be u…
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Submit your add-ons in this issue, thanks for your contribution!
Submission template:
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**ID:** (optional, use only to determine which addon in mobi to update)
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Hi,
I am trying to reproduce the coronal mouse brain section tutorial https://jef.works/STdeconvolve/visium_10x.html.
If I use exactly the same code as the one shown in that tutorial, I get some…
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At the moment, Python users have to do ``from gph.python import ripser_parallel``. It is maybe a bit weird to have to import a subpackage called "python" in a python program. Should we change this, …
ulupo updated
2 years ago
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https://github.com/giotto-ai/giotto-deep/blob/bbb382a329ea98ffa7a624c41afe1d579d108f08/gdeep/models/simple_nn.py#L43
I think we should not have any activation here since the cross-entropy loss uses…