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Origin originally posted from Hannes: `specimen_from_organism.diseases[0].text`
In the browser, the request response was seen to have `diseases` in both `donor` and `specimen from organism`.
Pro…
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Most likely tied to #25.
Origin originally posted from Hannes: `library_preparation_protocol.library_construction_method.text`
In the browser, `protocols` was seen to be empty (`[]`).
Project…
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Origin originally posted from Hannes: `specimen_from_organism.organ.text`
In the browser, the request response was seen to have:
`Organ` is contained in specimens and not in samples (`[]`).
Pro…
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I'm hitting some errors when attempting to index the current RefSeq *Homo sapiens* reference genome `GCF_000001405.38_GRCh38.p12` using `bcbio_setup_genome.py`. Is RefSeq currently supported in bcbio?…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/SaskiaFreytag/schex
Confirm the following by edit…
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- Repository: https://github.com/reactome/ReactomeGSA
Confirm the following by editing each check box to '[x]'
- [x] I understand that by submitting my package to _Bioconductor_,
the package …
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Conference link: http://bioc2019.bioconductor.org/index
We plan to apply for a 10-minute talk + poster and a 50-minute workshop + poster.
10-minute talk + poster: https://docs.google.com/forms/d…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/markziemann/mitch
Confirm the following by editin…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/transbioZI/BioMM
Confirm the following by editing…
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In sparse methods, e.g., sPLD-DA (`splsda()`), could default values be set for arguments, that are not compulsory? In particular, could it be: `keepX = NULL`, `keepY = NULL`? It would be easier to fig…