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We have generated RNA-seq data for the same donors across two conditions. We have called QTLs on each condition separately. But to increase power we would like to perform a joint analysis treating th…
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I encountered an issure when I used this r package. No assay information could be found for ScoreJackStraw
Setting assay used for FindNeighbors.RNA.pca to RNA
No assay information could be found for…
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Hi, @rcorces @jeffmgranja @jgranja24 @keyuxi
I would llke to copy my entire ARCHR project cluster, embedding, umap ... into a seurat object but I do not succed to copy embeddings
I try many thi…
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Dear all,
I am running `deblur` standalone from qiime, and `sortmerna` is unable to generate the index for the RNA file.
I am using python 3.5.2 and sortmerna 4.3.4
Code-
`DB_DIR="/flash/Bour…
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Hi,
when I start the expvip-web, it occurs the error:
```
> bioruby-rna-explorer@ start /data2/tools/expvip-web
> npm run watch-js & rails s
Ignoring racc-1.5.2 because its extensions are not b…
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Host RNA-Seq currently does not work due to dated annotations and genomes.
Currently updating...
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We actually get a pretty good amount of micro-RNAs from BioPAX and reading. The reading systems pick them up as named entities but don't have the resources to ground them. BioPAX grounds micro-RNAs to…
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**Operating system**
UNIX
**Package name**
isoseq
**Describe the bug**
We performed single cell RNA sequencing using 10x 5p captures, Mas Isoseq library preparation and sequencing on Revio sy…