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Hello, I have encounter a new issue when running the scRNA-sequencing. And the error message is below. At first I thought it was due to the pandas package so I updated my pandas to the latest version…
yc508 updated
10 months ago
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There is several tutorials that would need some ❤️
Most of the changes are newcomer-friendly 😄
We created a checklist of the possible contributions on the tutorials: https://galaxyproject.github…
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Hi, thanks for developing TALON for long-read RNA-seq analysis.
I was working on the ONT direct RNA-sequencing data. Following the tutorial, I ran talon but there was an ERROR about sam files.
He…
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I am using tombo 1.5.1 on direct RNA sequencing data, and I encountered an issue that the resquiggle step never finishes.
Version of tools are as follows
Tombo 1.5.1
Numpy 1.19.5
Guppy 4.2.2
…
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At least in the 10x case, getting VDJ is often accompanied by gene expression data. As we are defining a format for the processed GEX data #409 , should we also provide a simple mechanism to record th…
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Creating this issue to keep track of random ideas for project name
@maximz :
> something simple like "infiltrate" or "infiltration" could work, or maybe a quasi-synonym like "percolate"
Some…
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I'm getting this error (see below). I used ont_fast5_api to demultiplex the multi-fast5s and then ran poreplex on those fast5s. Any input would be helpful. Thank you.
2019-01-31 14:21:01,777 Com…
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[Chen G, Yang X, Ko A, Sun X, Gao M, Zhang Y, Shi A, Mariuzza RA, Weng NP. Sequence and Structural Analyses Reveal Distinct and Highly Diverse Human CD8+ TCR Repertoires to Immunodominant Viral Antige…
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Copenhageni_Basecalled_Aug_16_2019_Direct-cDNA_NoPolyATail
Copenhageni_Basecalled_Aug_16_2019_Direct-cDNA_NoPolyATail_Qiagen
Copenhageni_Basecalled_Aug_16_2019_Direct-cDNA_PolyATail
Icterohaemorrha…
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'Omics terms can be difficult to learn. Having them described in a single page may help new comers to overcome this barrier quickly and transfer knowhow that may be a pain to transfer through more for…
meren updated
2 years ago