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I'm trying to sketch the [RVDB, the Reference Viral Genome Database](https://rvdb.dbi.udel.edu/). The clustered file is ~600 MB.
```
sourmash scripts manysketch C-RVDBvCurrent.manysketch.csv -o C-…
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When using files with a '-' in them the DNA delimiter causes incorrect splitting, therefore, breaks the app. I recommend you change the delimiter to a value that filesystems cannot use e.g. @
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Hello,
I would like to report an issue in prior and scenario checking. So after running the simulations, I need to check if my observed data is located within the cloud of priors. Using SSR data, t…
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I was wondering, in the cpg0016-jump dataset, where can I locate the image data associated with each of the five
channels and six fluorescent dyes described in the [Chandrasekaran et al. 2023 preprin…
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Hi,
I wonder if anyone in this community can help me figure out the reason behind the discrepancy in counts. Please see below:
I am using HTSeq-count to generate counts from two different types …
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After successfully installing RF2NA in my linux workstation, I tried to run these commands
```
# run Protein/RNA prediction
../run_RF2NA.sh rna_pred rna_binding_protein.fa R:RNA.fa
# run Protein…
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### Contact details
mtomasino@ciimar.up.pt
### Dataset Title
Porto_marine_monitoring_dataset
### Describe your dataset and any specific challenges or blockers you have or anticipate.
I am leading…
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### Contact details
fredoket@gmail.com
### Dataset Title
Mangrove environmental DNA survey dataset
### Describe your dataset and any specific challenges or blockers you have or anticipate.
I am c…
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INFO @ Wed, 11 Sep 2024 16:26:23: Processing GTF files ...
INFO @ Wed, 11 Sep 2024 16:26:23: Building gene index .......
100000 GTF lines processed.
200000 GTF lines processed.
300000 GTF…
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### Description of the bug
Experiencing 137 on samtools sort, after talking with slack community and seqeria, seems to be related to [this](https://github.com/nf-core/methylseq/pull/330)
### Command…
bc2zb updated
1 month ago