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At some point (possibly associated with the migration, not sure) this problem came up recently. There are about 150 sequences in the fasta but doesn't have associated metadata in the database. The lis…
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Proposal for a sublineage of B.1.617.2
Earliest sequence: 22.08.2022 (Philippines)
Countries detected: Philippines (4), Austria (1)
This sublineage is defined by c.75 mutations compared to root (…
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Hi
I have a small query. When I primarily process my sample using `wf-artic` pipeline and the upload consensus fasta on nextclade, I do not obtain any private mutations.
However, when I perform…
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@Borisuitham unluckily cannot open an issue on its own due to to family reasons.
He asked me to open this one as this seems quite urgent to be reviewed.
It was spotted by him and tracked mostly by …
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### **Description**
**Sub-lineage of:** JN.1 (BA.2.86.1.1)
**Earliest sequence:** 2024-1-1, Brazil, Bahia, Anguera — EPI_ISL_18864440
**Most recent sequence:** 2024-1-13, Brazil, Bahia, Salvador — …
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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Description of the Bug/Issue
Hello!
We were in the process of preparing an upload of Influenza B sequ…
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### **Description**
**Sub-lineage of:** FL.1.5.1
**Earliest sequence:** 2023-9-11, Haiti — EPI_ISL_18360180
**Most recent sequence:** 2023-10-6, Haiti — 2 sequences
**Countries circulating:** Hai…
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It seems that S:F456L is very convergent in JN.1 now. (**last complete update June 19**)
- [*] Branch 1: JN.1.1.2+S:F456L, #1147 DEAD
- [*] Branch 2: JN.1.1+C9142T+S:F456L, #1249 DEAD
- [x] Bran…
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### **Description**
**Recombinant of:** JN.7 (BA.2.86.1.7) and HK.26 (EG.5.1.1.26)
**Earliest sequence:** 2023-11-27, Denmark — EPI_ISL_18617579
**Most recent sequence:** 2023-12-18, Denmark — EPI_…
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**Transferred from https://github.com/sars-cov-2-variants/lineage-proposals/issues/996**
### **Description**
**Sub-lineage of:** FL.1.5.1
**Earliest sequence:** 2023-9-11, Haiti — EPI_ISL_18360180…