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Hi! I´m trying to run Masurca with Nanopore and Illumina PE reads. The program started correctly, but after a short time I get this error massage:
“error reading mega-reads file at /opt/Masurca/MaS…
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Hi, I'm trying to do de novo assembly of a fungi genome that has an average size of 53Mbp.
I keep getting this error
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[Wed Jan 29 14:52:12 CET 2020] Processing pe library reads
[Wed Jan 29 15:…
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Hello, I tried to download the last version of masurca and it seems there is an issue with the tar file. Is not a tar and it lloks like an HTML file.
https://github.com/alekseyzimin/masurca/release…
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Dear Team MaSuRCA,
I'm getting the below error in MaSuRCA - 3.2.2
"Assembly stopped or failed, see CA.mr.41.15.13.0.02.log"
[CA.mr.41.15.13.0.02.log](https://github.com/alekseyzimin/masurca/files/2…
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I noticed issues with the way polca is calling samtools which breaks with current versions of samtools. When masurca is installed in an env with other samtools dependencies it is not possible to insta…
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Hi,
I am trying to polish a SPAdes assembly using short Illumina reads with POLCA. I compiled MaSuRCA v3.4.2 as recommended.
Everything goes well until the 'Calling variants' step, at which ever…
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I'm trying to package masurca for bioconda, however the conda build process is failing to successfully extract masurca tarballs. This is a result of the tarballs being created with a preceding '/' on …
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Hello MaSuRCA team,
I used MaSuRCA (version: MaSuRCA-3.2.7) to de novo assemble Brassica genomes. However, I meet the following error messeage:
Running locally in 1 batch
compute_psa 2044593 5215…
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Dear Aleksey,
I would like to know if you support this particular conda release and if you could add the FLYE_ASSEMBLY option to the package?
conda package: https://anaconda.org/bioconda/masurca…
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Dear Team MaSuRCA,
I'm getting the below error in MaSuRCA - 3.2.9
"Assembly stopped or failed, see CA.mr.41.15.13.0.02.log".
Could you help me check the error?
Thanks,
Regards,
Fuyou
[CA.mr…