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Hi Zhichao,
I got 55 MAGs from the 6 metagenome samples, but some typical genes for some MAGs were lost maybe during the binning or refinement process. So, is it okay that I use the assembled conti…
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As mentioned in #4, this pipeline is supposed to target any distinct transcriptome sequence, meaning anything that has never been observed in any DNA before. (I don't think we need to worry about RNA …
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The service-info for sequence collections will need to inherit from [this specification](https://github.com/ga4gh-discovery/ga4gh-service-info/blob/develop/service-info.yaml) but additional fields can…
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This issue contains monthly updates to the ranked list of PubMed papers for curation. The full list can be found [here](https://github.com/tanayshah2/bioregistry/blob/5560dcf284f2c0309287e0a5a551e435e…
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Sometimes, Ray Meta seems stuck. The log output looks as follows:
```
...
Rank 7 computing contig abundances [63043/130531] [118/118]
Rank 77 computing contig abundances [62815/130236] [1/118]
…
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Dear FastV Team,
I am testing fastv for many samples related to a reference virus genome. Is it possible to combine resulting html files for a comparative view?
This feature would be very useful…
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I came across this paper in a Web of Science alert that may be helpful in writing our grant:
Shojaie, A., & Sedaghat, N. (2017). How Different Are Estimated Genetic Networks of Cancer Subtypes?. In…
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Hi,
Thank you for the great tool. I want to use an ONT long-read to assemble the mtDNA of _Spirodela polyrhiza_. I have the following error. How can I change the option of PMAT to pass the error m…
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Dear all
I have a problem in make
BUILD FAILED
/root/RDPTools/classifier/build.xml:50: java.net.SocketException: Resource temporarily unavailable
at java.net.PlainSocketImpl.socketConnect(…
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This issue contains monthly updates to an automatically ranked list of PubMed papers as candidates for curation in the Bioregistry. Papers may be relevant in at least three ways:
(1) as a new prefix…