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I'm trying to infer influence between cell-type contexts but only have 1 of the celltypes availible.
I want to be able to generate a set of potential cell-cell interactions that might not be autocr…
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Is there a reason y'all can think of that I would be getting an 'all counts filtered' error when using human genes?
I started with a mouse Seurat object and converted into a h5ad object with human …
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## Description
I encountered a KeyError when running the statistical analysis method in CellPhoneDB with interaction scoring enabled. I want to gracefully handle missing keys by returning np.nan inst…
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Hello, I really enjoy your work. I noticed that your current downstream task for disturbance prediction is related to genetic perturbations. Is there any method to achieve perturbation prediction simi…
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Hello,
I am trying to build using NVIDIA C++ Compiler `nvc++` version 24.5
```
CC := nvc++
CFLAGS := -O3 -fomit-frame-pointer -mp -std=c++11
```
It complains with the following error(s):
`…
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# HUMAN CELL ATLAS ASIA MEETING 2020
A virtual meeting hosted by HCA Asia, October 22nd-23rd 2020
人类细胞图谱（HCA），创建所有人类细胞的全面参考图，作为理解人类健康以及诊断、监测和治疗疾病的基础。
[HUMAN CELL ATLAS](https://www.humancellatl…
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Summary of request: Add a new organization to ROR
Add record:
Name of organization: Ecotaxie, Microenvironnement et développement lymphocytaire*fr
Website: https://irsl.u-paris.fr/umrs-1160-ecota…
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Creating this issue to keep track of random ideas for project name
@maximz :
> something simple like "infiltrate" or "infiltration" could work, or maybe a quasi-synonym like "percolate"
Some…
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Hi,
I followed your example starting from per-existing Seurat Object. Function "Improved_Seurat_Pre_Process" executed without any problems. However there is something wrong with the next step (which …
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Hi,
I am trying to reproduce Figure 1C from your paper "spatialGE: quantification and visualization of the tumor microenvironment heterogeneity using spatial transcriptomics" which is about the visua…
pcr08 updated
1 month ago