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**Describe the bug**
first on some random mzml files (i assume it isnt random), i received the following warning upon instantiating a reader object.
[Warning] Not index found and build_index_from_sc…
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There seem to be some wrappers possible according to:
https://www.intel.com/content/dam/www/public/us/en/documents/presentation/improving-vectorization-efficiency.pdf
also
https://github.com/croset…
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I've been trying to download some of the mzML files used to build MassIVE-KB, but it seems there seems to be a consistent problem for files in the `ccms_peak` directories. For example, here I try to d…
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Hell everyone,
it seems like the CTD entry when using `-write_ctd` is wrong. It allows for two values `true/false` which, when applied, lead to errors like this:
Trailing text argument(s) '[…
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I miss the ionization mode in the parquet format.
Did you consider not storing the intensities and masses as arrays but exploding them?
I find the data much easier to analyse if the data is in long…
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Hi,
I am using `MALDIquant `extensively to process MSI datasets. These datasets tend to be extremely large (
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Data is an mzML converted from an Agilent 6495 triple quad, run in dynamic MRM mode
```
data = readMsExperiment(file)
spectra(data)
# msLevel rtime scanIndex
#
#1 2 9…
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Assuming I have an retention time range and an m/z range, what would be the fastest/easiest way to extract the intensity values within these ranges from an mzDB file?
Looking through the exported m…
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I am using msconvert through docker.
When the outfile is opened for writing the system function open() is invoked with flag O_RDWR.
Why not O_WRONLY?
The file is to be written right?
I am de…
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**- Describe the issue or question:**
Hello,
I'm attempting to use the new diaTracer function in Fragpipe with diaPASEF data for no-enzyme peptidomics. Attaching the log file here. diaTracer seemed …