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### Description of feature
Hi,
In SRA some of the run accessions have no associated files.
For example bioproject [`PRJEB18755`](https://www.ncbi.nlm.nih.gov/Traces/study/?query_key=1&WebEnv=MC…
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I've hit an odd issue where `fastq-dl` pulls FASTQs without issue, but they are in SRA Lite format instead of the typical SRA Normalized format.
FASTQs in SRA Lite format have `?` for all Qscores f…
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Hi , I had configured the NCBI STAT tool as per the steps mentioned in https://www.ncbi.nlm.nih.gov/sra/docs/sra-taxonomy-analysis-tool/ and was able to successfully run the input file given in Examp…
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See for instance:
- https://www.ncbi.nlm.nih.gov/sra?term=SRX5376909
- https://www.ncbi.nlm.nih.gov/sra/?term=GSM3607580
![image](https://user-images.githubusercontent.com/15323399/70889949-1abfbf8…
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Thank you very much for creating HI.SIM. It works very well in most cases, but on one of my data sets, it crashes.
I get a floating point exception when using HImodel on a certain set of human hifi…
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Hello -- thank you for making `reutils`, this package is very convenient for data mining from NCBI databases. However, I have noticed some error in the latest version. Here is what I tried:
```
ac…
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### Data Owner Name
National Library of Medicine (NLM)
### Data Owner Country/Region
United States
### Data Owner Industry
Resources, Agriculture & Fisheries
### Website
https://www.ncbi.nlm.ni…
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As reported in https://github.com/ewels/sra-explorer/issues/14 and mentioned in [this blog post](https://ncbiinsights.ncbi.nlm.nih.gov/2019/10/17/users-of-the-sra-ftp-site-try-the-sra-toolkit/), the N…
ewels updated
3 years ago
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Hello,
Do you have an example of the info.tsv file?
The link to the [GEO](https://www.ncbi.nlm.nih.gov/gds) website is not really helpful...
Thank you,
Christina
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Hello,
Thank you for providing miniprot-boundary-scorer to the community, the tool is really nice.
We wish to include it in our snakemake pipeline. Having to compile a software means that we need t…