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Hi, I am using Biopython 1.79.
Sorry, I admit this is a detail, but I reference it in case comment parsing is updated in the future. I could participate in that.
### Expected behaviour
Commen…
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We can keep this course short (1-day), covering only some general/basic concepts in phylogeny:
- What is a phylogeny
- MSA
- Phylogenetic inference
- Tree uncertainty (bootstrap)
- Bayesian inf…
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Hi @wadedismukes @jjustison ,
I've been using treeducken for teaching a phylogenetic course, in which the students will generate a bunch of gene trees under a specific species tree. However, I found …
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Hello. This is part of the message provided by the program. I have tried many thinks but nothing appears to work when I want to analyze nt. The aa analysis runs properly. Your comments will be appreci…
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We should look into setting up a converter for APOGeT. Not yet sure if I'm understanding the tool's goal completely (currently sitting in a talk describing it), but it looks like an interesting way to…
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The goal is to find **reliable duplication events** in the **phylogenetic trees** of **symmetric repeats**, once they have been identified with CE-Symm. The automatic detection of evolutionary events …
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Software Bazaar: NAME OF SOFTWARE
**Authors:** Michael J. Landis, Jeremy M. Brown, Lyndon M. Coghill, William A. Freyman, Tracy A. Heath, Walker C. Pett, April M. Wright, Sebastian Hoehna
**Sour…
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Hello,
Thanks for such a great tool for phylogenomic analyses!
I was wondering if there was a way of labelling the branch of the last common ancestor of two species in a phylogenetic tree prog…
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Using the PMID for PAINT is not clear to many groups, so I have restored GOREF_0000033 and updated it
> The Phylogenetic ANnotation using Gene Ontology (PAN-GO) method annotates evolutionary trees …
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#### BuddySuite: Command-line toolkits for manipulating sequences, alignments, and phylogenetic trees
**Authors:** _Stephen Bond_, Karl Keat, Sofia Barreira, and Andy Baxevanis
**Source code:** [G…