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I am trying to read plasmid sequences from different sources and still getting this error:
> Error in .normarg_isCircular(isCircular, seqnames) :
> the length of the supplied 'isCircular' vector …
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This SEP proposes a set of terminology and practices for representing genetic parts and functional devices at various stages of design, synthesis, and assembly. These practices are intended to represe…
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Hallo.
Can you help me?
anna@anna-G3-3590:~$ prokka
Name:
Prokka 1.14.5 by Torsten Seemann
Synopsis:
rapid bacterial genome annotation
Usage:
prokka [options]
General:
--help …
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Hi,
I find it useful if one can choose different colors for the features in the plasmid map.
Currently , if you label a Sequence as a promotor this part is then green.
Maybe best is if you can cho…
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>hundreds or thousands of “extra” genes per genome,
but black box is black box
1)
for example
PGAP report 434 genes on plasmid
https://www.ncbi.nlm.nih.gov/protein?LinkName=nuccore_protein&fr…
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Dear Torsten,
**first of all thanks for your efforts on Prokka ! The whole community owe you one.**
I annotated my assemblies with Prokka 1.14.6 with "--compliant" option.
When uploading the …
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Recently bacterial labs have started to perform iCLIP and our lab is planning to perform experiments on some bacterial strains. It will be a big enhance to support all of this community with a tool av…
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OWL has a handful of ["profiles"](https://www.w3.org/TR/owl2-profiles/) that specify subsets of the language. In OBO we tend to use the EL and DL profiles. The DL profile has most OWL features. The EL…
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Hi!
First of all, thank you for putting together such a nice pipeline! It's very convenient to have all of these tools in one place.
I installed BEAV using conda as per instruction on the readme…