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GanttStart: 2022-03-29
### Background
Transformed at high efficiency using Bloom lab's liquid recovery protocol: https://github.com/rasilab/rqc_aggregation_aging/issues/98
Library prepped: https://g…
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Suggested yeast dataset of interest to me: Ribosome profiling data [GEO: GSE131176](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE131176).
From *Condensation of Ded1p Promotes a Translation…
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I've been analyzing template matching results on ribosomes for a large number of micrographs, and a fairly consistent issue I've been seeing is a large band of high intensity near the edges of the MIP…
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```
From Stefan:
- Erythrocyte subClassOf lacks_part some ribosome
- 'erythroid lineage cell' and (lacks_part some nucleolus) and
(lacks_plasma_membrane_part some 'CD19 molecule') …
(145 uses …
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http://doi.org/10.1101/067108
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That way, build processes don't have to depend on _which_ flavor of Ribosome is used.
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when trying to run this app:
- `nix develop`
- `pnpm i`
- `pnpm start`
I get the following conductor error:
`
[1] Error: Failed to install app: Expected AdminResponse::AppInstalled but got Err…
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Prerequisite: the TEM simulator is wrapped with CTF and noise, using the container TEM simulator.
Scope: generate 1k particles of the following datasets to be made available on ioSPI.
1. ribosom…
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\* CHEBI:36080 ! protein [DEF: "A biological macromolecule **minimally** consisting of one polypeptide chain synthesized at the ribosome."]
(highlighting is mine)
contrast with:
\* PR:000000001 ! p…
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Not "study" as in for an exam. But have a general understanding - especially proteins, ribosomes, and enzymes. These are the easiest to "tinker" with. They're like control structures, which decide how…