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Dear,
Can some more information be given on how the three csv files for opt$marker (e.g. mutations_list_grouped_pango_codonPhased_2023-02-17_Europe.csv) , opt$smarker (mutations_special_2022-12-21.…
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I am creating a workflow that has many steps that use different tools, and I'm creating [minimal Docker images](https://github.com/Niema-Docker) for each of the tools. I was wondering which of the fol…
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The `sarscov2_protein_pdb_map.csv`, `hcv1a_protein_pdb_map.csv` and `hcv1b_protein_pdb_map.csv` datasets are empty except for text along the lines of:
```
one of the required files [unreviewed/h…
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**Date**: Mon Dec 12th 2022
**Time**: 5pm UK time ([other times](https://www.timeanddate.com/worldclock/meetingdetails.html?year=2022&month=11&day=14&hour=17&min=0&sec=0&p1=43&p2=136&p3=37&p4=771&p5=…
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[210604_documentation_feedback.md](https://github.com/BIMSBbioinfo/pigx_sarscov2_ww/files/6596004/210604_documentation_feedback.md)
# Introduciotn
"of all reads which are not aligned to SARS-C…
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**Blocker for:**
* #1520
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Currently, the WDL input compound type ```Map[]``` is not handled by the translator. (https://github.com/openwdl/wdl/blob/main/versions/1.1/SPEC.md#mapp-y)
~~A workflow using Maps is given in this …
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### Have you checked the docs?
- [X] [nf-core website: troubleshooting](https://nf-co.re/usage/troubleshooting)
- [X] [nf-core modules documentation](https://nf-co.re/docs/contributing/modules)
### …
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Hello,
Thank you very much for your ongoing development of VADR. I love it!
I recently installed via Conda the latest release of VADR (v 1.6.4), and encountered an issue attempting to download …
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The Sarscov2 data API does not return all the required information. The endpoint currently is a very simple select * to get data to test dashboard functionality on.
* Need to update the api to get all…