-
any chance to let nuclei burp plugin support multiple urls selected e.g. from burp history I selected multiple urls so instead of generate template it will run nuclei directly by using my specific tem…
-
Currently, we use only one of the DP feature sets for linear modeling and power analysis. We should use both.
It would also be good to clarify what is different between the feature spaces. Are ther…
-
Dear author,
Thanks so much for developing the great tool. I recently applied it on a single nuclei data, and encountered some errors I have never met with 10x single cell data, here is the error:
…
-
Hi! Thanks for designing this great tool. I've been using it quite a bit on Visium slides and it seems to have worked really well in the past. Currently I'm trying to use this on tissue slides that ha…
ssobt updated
9 months ago
-
Hello,
I'm analysing single-cell full-length RNA sequencing data. I would like to perform an analysis on alternative splicing exons, which has been mentioned multiple times in your research group's…
weib3 updated
2 months ago
-
Thanks for you contributions.
I notice that in nuclei dataset, one image have multiple masks for each nuclei. However, when training, in your codes, it seems that each image has only one mask. I wond…
-
Take a look at following issues:
- [x] Straightening process relative to existing data set
- [ ] Scaling new data set relative to existing data set -- with goal of having 3D representation of both d…
-
Project Title: Transcriptomic classification of human retinal cell types with single-nuclei RNA-seq.Project UUID: 9c20a245-f2c0-43ae-82c9-2232ec6b594fWrangler/s: Zinaida,A,Perova; PI/s: Margaret,,DeAn…
-
Human 10X snRNA-seq support.
*Why?* Initially the interest in snRNAseq came from the need to be able to process large cells (i.e. cancer) or oddly shaped cells (i.e. brain neurons) that would not pro…
-
Hi Rongxin,
SnapATAC is an awesome package for single cell ATAC-seq analysis. After peak calling by MACS2, I am wondering how can I generate the bdg or bigwig file of a subset of nuclei based on co…