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**Describe the bug**
- `TrodesPosV1` gives option to upsample position data
- However, `video_frame_ind` is _not_ upsampled in this process
- Causes two errors:
1. `video_frame_ind` is not acc…
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### Who is the audience?
_Who might want to know this? What other groups or organizations might be interested?_
* Anyone working or wanting to start working with spatial data/GIS.
### Why is th…
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Hi I used the old mesmerize and found all the downstream analysis possibilities rather helpful. I cant, however, figure out, whether the new mesmerize-core offers equal tools and if so, how to use the…
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Hi Anna,
I want to use NCEM for other MERFISH data to compare with other tools that how the information differs. I followed your tutorial
https://github.com/theislab/spatial_scog_workshop_2022/b…
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Here is our proposal for a CTV on Archaeological Science. We have organised the proposal into the sections requested in the instructions (scope, packages, overlap, maintainers):
_Scope_:
Archa…
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To describe what the RasterizeSet function does, I'll need to make an educated guess based on the name of the function and the typical operations associated with rasterization in the context of geogra…
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Clean SLD data, factor analysis and spatial auto correlation example by 910add0f8cdf4128179d36f9d525f4ab10f837df
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Dear @sqjin
Thank you for providing this valuable resource.
I have two questions,
Q1.
I want to understand the impact of stroma spots on neighboring cells.
In such cases, is it reasonable t…
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## Description
When I use `sq.pl.ligrec` after `sq.gr.ligrec(
adata,
n_perms=100,
cluster_key="cluster",
clusters=["Polydendrocytes", "Oligodendrocytes"],
)
`, it always …
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Hello, can you provide the data for analysis in visium_human_dorsolateral_prefrontal_Cortex.r?
I can get the raw data, but I'm not sure what goes from the raw data to the data for your analysis.