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Hi @lilit-nersisyan
Output from the testrun shows for me the avg. len as: 10683320 bp is this ok?
BW,
Bart
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Hi, I recently managed to convert my agp file from pretextview to a tpf and chrs.csv file, however, when I use the rapid_join.pl script to convert these into a fasta file, i get a file with rows of '>…
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The Telomere-to-Telomere (T2T) consortium has released a full build of the human genome based on the CHM13hTERT cell line, described here: https://github.com/marbl/CHM13
The complete genome is avai…
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"We mapped reads to the pangenome to efficiently capture telomere length across the diverse
population. A references file of 500kb of subtelomere sequences was assembled from each of the
genomes (…
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### Description of feature
Add the HOSTILE tool for host decontamination
https://www.biorxiv.org/content/10.1101/2023.07.04.547735v1
https://github.com/bede/hostile
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Is it "three-track attention"? Just curious.
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Hi,
I've been trying tidk search, explore and then plotting with tidk plot.
Data on the plots are barely visible. Perhaps a log scale would be more effective ? I'm not sure if the counts I have …
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Short sequences repeated many times (i.e. telomeres) can result in the generation of poor sets with primers that bind many times within a very short distance. Masking these regions would probably impr…
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[Two faces of p53: aging and tumor suppression](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2190721/pdf/gkm744.pdf)
[Declining p53 function in the aging process](http://www.pnas.org/content/104/42/1…
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Hello,
I'm using racon to polish a close-to-complete genome assembly where most contigs have telomeres on the end. Racon is removing many of these telomeres. Is there any way I can avoid racon remo…