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Hi,
I'm having an issue with the "selectedPathways" argument in the oncoplot function, when using my own user-defined pathways. I either get the error below (with code):
```
oncoplot(maf = wgs.m…
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**Describe the issue**
I am analyzing whole genome sequencing(WGS) data in rice(Oryza.sativa) plants. When I use the following command to create the rice database, I encounter this problem. It should…
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ids:
2146, 2036, 2158, 2175
example id: 2183:
`https://data.deadtrees.earth/cogs/v1/7b1b130e-e6c1-47a6-94f0-a5e21d03467a_uavforsat_DDH005_ortho/7b1b130e-e6c1-47a6-94f0-a5e21d03467a_uavforsat_DDH…
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When I try to load collections from my endpoint with the plugin I get the following error:
>Populating data query attributes failed due to the following error:
>list indices must be integers or sl…
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hi~
When I use this command, I got these errors.
command:
metawrap binning -o /home/bioinfo/sunyy/work/CRC/WGS/PRJNA389927/guild/bin -t 8 -a /home/bioinfo/sunyy/work/CRC/WGS/PRJNA389927/guild/test/…
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Hello gggenomes folks.
I am currently attempting to run your program on my dataset that are subsections of:
1. A Nucleotide Fasta file- a portion of my chromosome JAEVHH010000002.1 from length 609…
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The contributors page for a given repository lists substantive PRs whether or not they are open or closed.
Only the merged PRs should be listed.
See https://github.com/w3c/ash-nazg/pull/269#discus…
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Hello,
I need to compare different CNV callers before the segmentation step, and I would like for all of them to produce results on bins having the same size. Is it possible to manually set a valu…
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Hi all, I am working on benchmarking variant calling tools and I am now simulating low and high coverage hifi reads for this purpose. But I am not sure whether my workflow is correct as I received mes…
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**Is your feature request related to a problem? Please describe.**
Add WGS background data for goat animals coming from [Berihulay et al. 2019](https://doi.org/10.3389/fgene.2019.01190)
**Describe…