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```
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘dplyr::filter’ by ‘stats::filter’ …
gaow updated
6 months ago
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For these two jobs:
[4t5l6mskvolyybz2172bh](https://23.22.157.8/#/opcenter/jobs/4t5l6mskvolyybz2172bh)
[dxa7uphemnjai3l0i05j6](https://23.22.157.8/#/opcenter/jobs/dxa7uphemnjai3l0i05j6)
they …
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Hello,
When I used the methylation_calling sesame pipeline using the methylation.sif container, the run fail, while when I used my own environment, the pipeline run.
Here is the command used:
`sos …
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We have several jobs that stays in Initializing for a couple of hours like this:
![image](https://github.com/rfeng2023/mmcloud/assets/917985/3d4249aa-8053-495e-bc33-1a8e68f18e5f)
What is curious…
gaow updated
7 months ago
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I'm trying to run the trans analysis using the TensorQTL.ipynb, but I'm receiving the below error. Any thoughts? Thank you in advance!
sos run xqtl-pipeline/code/association_scan/TensorQTL/TensorQT…
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![image](https://github.com/rfeng2023/mmcloud/assets/917985/bf7f6975-1472-43e9-99f6-d66f2de92b71)
The reason is:
```
2024-02-21T02:30:54.43: Using cached instance params: Zone:,InstType:r5.…
gaow updated
7 months ago
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Hello YangWu
Thank you for developing OPERA!
I had some questions about OPERA. First, i noticed that OPERA or SMR does not filter snps with ambiguous strand, could it influence the results? Se…
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write new webservice for retrieving xQTLs in the format required by IGV
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I'm running `rnaseqc_call` on a dataset and it never appears to complete. Upon running the command initially, the jobs are verifiably submitted to the job queue. The jobs do run for some time in the q…
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To Whom It May Concern,
First and foremost, I would like to express my gratitude for your effort in creating and maintaining the eQTL Catalogue, which has been an invaluable resource for the resear…