-
Does MXCuBE support a fully automated (i.e. unattended) data collection mode? I think the answer is no, but I want to be sure I'm not missing something.
A fully automated mode would allow me to add …
-
Parsing is one of the slowest steps of this program. I use very big macromolecules, and the parsing makes my program appear unresponsive. I'd like to minimize that.
1) How do I put up some status me…
-
2.3.5, Container: here an explanation which containers can be used for multimers is missing. Suggestions: unspecified chemicals (2.3.1), simple chemicals (2.3.2),macromolecules (2.3.3), genetic entiti…
-
At the moment, there is only one SBO term for "multimer". This means we need to combine the SBO term "macromolecule" with the term "multimer" to know how to represent hemoglobin. However, SBML for ins…
-
/usr/local/rvm/gems/ruby-2.3.0/gems/bel-0.7.0/lib/bel/translator/plugins/rdf/monkey_patch.rb:16:in `to_rdf_vocabulary': undefined method`end_with?' for nil:NilClass (NoMethodError)
from /usr/l…
-
Gene Ontology Term: lipid tube assembly
GO:0060988
Aspect: Biological Process
current definition: The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular…
-
- Using the alpha deployment, open up the example query for "TP53 and MDM2/4 alterations in GBM".
- Go to Network tab
- Open up SBGN view for interaction between MDM2 and UBE2L3
- Select one of the ma…
-
While reading more carefully over the spec, I noticed figure 2.53. While the intend is clear, this example is not quite valid.
By depicting IP3R on the "membrane" of ER, we imply that placing EPN's …
-
We currently have
![image](https://cloud.githubusercontent.com/assets/112839/13296856/7255653e-db27-11e5-9524-7f33668b9142.png)
Protein complex is defined so that it _does not_ encompass ribonucleop…
-
Users asked me to add "protein" in SBO, to match the BioPAX class "protein". Reluctant to duplicate ChEBI, I explored the related tree. We have:
macromolecules
--[i]biomacromolecules
------[i]informa…