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I've been having a lot of issues with the expression median files, this is one example.
shaba033$./metaImport.py -s /Users/shaba033/Downloads/coadread/tcga -n -o
Starting validation...
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Hi,
I noticed in your paper that you subsetted for DNA methylation probes from the illumina array with the top 1% of variance, as well as the RNA-seq genes with the top 20% of variance across sampl…
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Hi
Can you help with the following error please.
Thanks. Appreciate your help a lot.
Hemant
```
GDCquery(project = "TCGA-KIRC", data.category = "DNA methylation", data.type = "Raw inten…
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I removed this ticket. My dataset is RNA modification, which is not supported yet by nanopolish. My bad. Thanks, Jared.
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I think we should merge up "residue" terms phosphorylation
we don't appear to have many annotations to these, it's just these ones: and a few more
-Control type (activation/inhibition) : select box of…
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Hi,
The definition of the RNA N6-methyladenosine methyltransferase complex should be updated to reflect that it (1) not only mediates mRNA methylation and (2) extent the composition of the complex in…
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For some reactions, like '[activated human TAK1 phosphorylates MKK3/MKK6](https://reactome.org/PathwayBrowser/#/R-HSA-450294&SEL=R-HSA-450346&PATH=R-HSA-168256,R-HSA-168249,R-HSA-168898,R-HSA-168164)'…
goodb updated
5 years ago
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All Cdc73/Paf1 complex subunits are annotated to histone modification:
SPBC13E7.08c IPR007149
SPBC17G9.02c IPR007852
SPAC664.03 IPR007133
SPBC651.09c IPR031102
SPAC27D7.14c IPR031101
Appe…