jts nanopolish issues - Githubissues

jts / nanopolish

Signal-level algorithms for MinION data

MIT License

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nanopolish call-methylation showing Segmentation fault (core dumped)

#1152 shakti83kumar opened 1 day ago
4
some issues about nanopolish polyA module

#1151 lopp1Y opened 1 month ago
0
Does nanopolish polya support cDNA sequencing? "noregion" problem

#1150 Xing-2024 closed 1 month ago
2
nanopolish eventalign taking to much time to finish...

#1149 baibhav-bioinfo closed 1 month ago
1
nanopolish eventalign slow processing speed

#1148 vetmohit89 closed 1 month ago
1
Does Nanopolish still not support R10.4.1 for methylation analysis

#1147 Taylorain closed 2 months ago
2
Obtaining TSV output with R10.4

#1146 psorigue opened 2 months ago
1
Nanopolish calling methyaltion

#1145 xyy-xiao opened 2 months ago
1
Clarification on R10.4 and polya

#1144 bnpapas opened 2 months ago
3
poly A will not open Bam file

#1143 jayradke opened 3 months ago
1
cannot find shared library (libhdf5.so.10)

#1142 claudiacarter opened 4 months ago
0
Segmentation fault in nanopolish eventalign

#1141 lyj95618 opened 6 months ago
1
After basecallling with dorado, nanopolish was unable to recognize methylation information

#1140 happier21 opened 7 months ago
7
does nanpolish work with RNA004

#1139 mocherry closed 7 months ago
5
nanopolish with fastq

#1138 mocherry closed 7 months ago
3
frequency of each variant per sample

#1137 emilydolivo97 closed 7 months ago
3
Nanopolish polyA on RNA004 data

#1136 rugilemat closed 7 months ago
2
nanopolish variants vs freebayes

#1135 emilydolivo97 closed 7 months ago
1
can nanopolish work without a genome alignment?

#1134 haannguyen closed 7 months ago
2
Nanopolish Call-methylation error

#1133 bebert30 closed 7 months ago
1
Reads number of nanopolish output

#1132 guangzhaocs closed 7 months ago
2
Docker Build Error

#1131 tutkuiince closed 7 months ago
1
nanopolish with fastq

#1130 mocherry closed 8 months ago
0
Nanopolish with pod5 files

#1129 DIPLOMICS-SA closed 7 months ago
4
Problem with eventalign

#1128 MarioRinBarr closed 7 months ago
3
A nanopolish version v0.14.1?

#1127 hasindu2008 opened 9 months ago
0
Running 5 hours with the empty error.txt and empty .vcf output files.

#1126 JWang52md closed 7 months ago
2
A few questions about using nanopolish to estimate poly(A) tail length

#1125 lopp1Y opened 10 months ago
1
Make quits halfway without the nanopolish executable

#1124 ZachChua opened 10 months ago
3
methylated_frequency is 1.000 only

#1123 sachingadakh closed 10 months ago
4
Error installing dependencies?

#1122 ZachChua closed 10 months ago
2
Install fails because of HDF5 file

#1121 jayradke opened 10 months ago
9
How does call-methylation work?

#1120 isnmn closed 10 months ago
3
Where can I find bisulfite data?

#1119 fengyilin118 opened 11 months ago
1
nanopolish polya outputting NO FILE LOADED

#1118 glf20 opened 11 months ago
6
Nanopolish Variants Using Low Proportion Of Reads

#1117 seanmsjkim opened 1 year ago
0
pod5 to fast5 and nanopolish call-methylation no reult

#1116 fhy1203 opened 1 year ago
4
Do I need to convert U to T for nanopore direct RNA m6A analysis

#1115 wuy24 opened 1 year ago
2
Compare the nanopolish methyaltion output with bismark output to analysis the correlation

#1114 Modernism-01 closed 10 months ago
1
Nanopolish call-methylation Processing Speed

#1113 ghost opened 1 year ago
2
nanopolish polya with guppy 6.0.6

#1112 sunsetyerin opened 1 year ago
1
could not find path to FAST5 for read

#1111 mumdark closed 1 year ago
6
duplex and nanopolish still make sense after assembly ?

#1110 DelphIONe opened 1 year ago
1
Better intuition for the meaning of QUAL

#1109 smsaladi closed 1 year ago
2
Weird binary output in tsv from methylation calling

#1108 sachingadakh closed 1 year ago
0
Is it feasible to combine runs basecalled with different models?

#1107 weishwu closed 1 year ago
2
creating bam files for 6mA and 4mC

#1106 Qvdauwer opened 1 year ago
1
question about multiple runs

#1105 huawen-poppy closed 1 year ago
4
Indexing Error

#1104 Grant-Fox opened 1 year ago
0
The output file of eventaligh is so large and no new information is written when it is 4TB

#1103 Dongxu-Zheng opened 1 year ago
0